1VF5
crystal structure of cytochrome b6f complex from m.laminosus
Total interactions analyzed 120
Total true interactions 53
Strongest Interaction Chains A-D
Int. Res. 36
Norm. En. per Res. -4.0444
Hub Node A(9)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -40.2223 -26.0143 -677.589 -743.8256 230 80 23 30017 2 20 13
A-C 0.0 -5.7326 -25.8952 -31.6278 36 0 0 1094 0 5 8
A-D -2.8282 0.0 -142.772 -145.6002 36 4 6 5082 0 1 1
A-E 0.0 0.0 -142.368 -142.368 57 21 14 7414 0 0 2
A-F 0.0 0.0 -0.106 -0.106 7 0 0 38 0 0 0
A-G 0.0 0.0 -2.2792 -2.2792 15 0 0 319 0 0 1
A-N -5.8218 -21.3835 -281.985 -309.1903 137 18 3 12423 1 17 6
A-O 0.0 0.0 -0.9624 -0.9624 9 0 0 152 0 0 0
A-Q 0.0 0.0 -72.8713 -72.8713 54 1 3 3179 0 6 4
B-C -14.3322 -13.8076 -192.834 -220.9738 97 26 10 9794 4 13 11
B-D 0.0 0.0 -20.2745 -20.2745 26 4 1 903 0 0 0
B-E 0.0 5.0061 -43.3615 -38.3554 45 3 0 2594 0 0 3
B-F 0.0 0.0 -0.0024 -0.0024 7 0 0 6 0 0 1
B-G 0.0 0.0 -81.6933 -81.6933 46 12 9 3964 0 2 0
B-N 0.0 0.0 -0.7218 -0.7218 7 0 0 94 0 0 0
B-Q -9.4394 10.3392 -101.505 -100.6052 61 11 3 4686 0 3 4
C-D 0.0 -0.8341 -100.983 -101.8171 48 16 5 5673 0 4 9
C-E 0.0 0.0 -0.5308 -0.5308 7 0 0 121 0 0 0
C-F -7.3428 0.0 -11.9113 -19.2541 34 3 0 1230 0 4 10
C-G 0.0 12.5732 -143.563 -130.9897 60 57 8 8640 0 2 6
C-H 0.0 0.0 -39.1333 -39.1333 35 4 4 2513 0 0 1
C-Q 0.0 -3.3736 -2.0365 -5.41 29 0 1 528 0 8 9
D-H 0.0 0.0 -1.7513 -1.7513 11 0 0 192 0 0 1
D-N 0.0 0.0 -66.1847 -66.1847 54 1 2 3247 0 5 5
D-O -5.9434 3.1829 -104.492 -107.2525 58 6 2 4199 0 4 5
D-P 0.0 -4.9562 -7.1056 -12.0618 21 0 0 567 0 3 7
E-F 0.0 0.0 -85.0333 -85.0333 36 17 13 4312 0 0 0
E-G 0.0 0.0 -0.6052 -0.6052 8 0 0 118 0 0 0
F-G 0.0 0.0 -100.68 -100.68 37 6 3 4354 0 2 2
F-H 0.0 0.0 -22.2342 -22.2342 26 1 1 1788 0 0 0
G-H 0.0 0.0 -41.6621 -41.6621 38 0 4 2639 0 0 0
N-O -45.3616 -20.9927 -634.111 -700.4653 230 87 20 28058 2 18 13
N-P 0.0 -6.997 -29.4298 -36.4267 36 0 0 1176 0 5 8
N-Q -2.9409 0.0 -128.104 -131.0449 39 5 7 4738 0 1 1
N-R 0.0 0.0 -151.647 -151.647 62 30 12 7512 0 0 1
N-S 0.0 0.0 -0.1058 -0.1058 12 0 0 48 0 1 0
N-T 0.0 0.0 -11.4759 -11.4759 22 3 0 731 0 1 1
O-P -22.614 -5.7574 -180.482 -208.8534 96 25 9 9252 2 12 9
O-Q 0.0 0.0 -21.4023 -21.4023 26 0 1 878 0 0 0
O-R -5.9485 4.1272 -76.5972 -78.4186 64 52 3 6482 0 0 5
O-S 0.0 0.0 -2.2398 -2.2398 6 0 0 90 0 0 1
O-T 0.0 0.0 -91.0076 -91.0076 54 16 10 4911 0 1 1
P-Q 0.0 -0.8255 -128.371 -129.1965 52 24 7 6583 0 4 9
P-R 0.0 0.0 -0.926 -0.926 7 0 0 152 0 0 0
P-S 0.0 29.6362 -23.7844 5.8518 26 3 0 1047 0 4 10
P-T -5.7019 8.0892 -136.399 -134.0118 70 13 6 7059 0 5 8
P-U 0.0 0.0 -20.2142 -20.2142 25 0 3 1549 0 0 1
Q-U 0.0 0.0 -0.1882 -0.1882 4 0 0 26 0 0 1
R-S 0.0 0.0 -84.2201 -84.2201 36 17 13 4400 0 0 0
R-T 0.0 0.0 -0.5855 -0.5855 8 0 0 116 0 0 0
S-T 0.0 10.7795 -101.833 -91.0536 44 7 3 4561 0 4 4
S-U 0.0 0.0 -23.5471 -23.5471 26 1 1 1808 0 0 0
T-U 0.0 0.0 -41.6248 -41.6248 38 0 4 2618 0 0 0