1VDM
crystal structure of purine phosphoribosyltransferase from pyrococcus horikoshii ot3
Total interactions analyzed 66
Total true interactions 33
Strongest Interaction Chains H-K
Int. Res. 34
Norm. En. per Res. -4.8009
Hub Node B(6)
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Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -13.454 -78.6401 -238.436 -330.5301 98 7 12 11238 4 29 31
A-C -24.7867 -30.5975 -200.173 -255.5572 66 5 8 7824 0 15 15
A-D -13.099 -33.9238 -84.1692 -131.1919 33 8 1 2925 9 15 17
A-E -22.4419 -28.7723 -207.896 -259.1101 68 5 9 7984 1 17 17
B-D -31.1962 -32.2254 -239.768 -303.1896 74 5 8 9021 2 18 18
B-E -5.7535 -76.6501 -83.3868 -165.7903 38 7 1 3234 8 16 18
B-F -37.4927 -10.2289 -245.126 -292.8476 74 6 8 9191 1 16 18
B-H -32.6954 -71.0667 -154.137 -257.8992 72 3 0 5806 5 36 37
B-J 0.0 0.0 -5.5694 -5.5694 8 5 0 383 0 2 4
B-L 0.0 10.0853 -0.8157 9.2696 10 0 0 143 0 8 7
C-D -19.9312 -66.0938 -251.38 -337.405 102 4 10 11296 3 27 31
C-E -14.5853 -9.5505 -192.205 -216.3408 69 4 9 7963 0 16 16
C-F 0.0 -60.5687 -80.3397 -140.9084 35 3 1 2890 7 16 17
D-F -34.02 -22.0612 -233.357 -289.4382 74 7 8 9027 1 16 17
D-H 0.0 0.0 -5.5471 -5.5471 8 4 0 350 0 2 4
D-J 0.0 13.379 -0.2946 13.0845 6 0 0 32 0 6 4
D-L -36.9081 -33.2242 -103.156 -173.2883 60 10 0 4603 3 29 30
E-F 0.0 -58.5812 -242.292 -300.8732 100 5 11 11380 2 27 32
F-H 0.0 15.1159 -0.6377 14.4781 7 0 0 69 0 7 5
F-J -40.2626 -24.8746 -122.186 -187.3232 60 4 0 5101 4 37 37
F-L 0.0 0.0 -11.4941 -11.4941 8 2 0 325 0 3 4
G-H -8.4163 -61.8468 -245.479 -315.7421 101 7 11 11487 5 27 32
G-I -20.8668 -28.5833 -196.018 -245.4681 70 6 8 7806 1 15 15
G-J -5.7364 -57.6294 -78.2782 -141.644 34 5 1 2789 5 15 16
G-K -31.4183 -23.3921 -206.739 -261.5494 72 10 9 8040 0 14 15
H-J -43.9546 -18.724 -230.348 -293.0266 71 5 8 8902 1 18 20
H-K -6.2455 -69.3417 -87.6446 -163.2317 34 6 1 2964 7 15 18
H-L -30.1572 -14.7057 -237.596 -282.4588 75 6 8 9177 1 17 20
I-J -13.4951 -66.6525 -233.542 -313.6896 98 6 11 11024 3 28 31
I-K -14.8566 -4.9561 -200.248 -220.0607 69 6 9 7811 0 14 15
I-L 0.0 -65.2315 -88.3587 -153.5902 35 4 1 3176 6 16 18
J-L -25.9413 -3.4934 -231.149 -260.5838 71 5 8 9023 1 16 17
K-L -7.6919 -74.2386 -242.588 -324.5185 98 8 10 11006 3 27 34