1V8Q

crystal structure of ribosomal protein l27 from thermus thermophilus hb8

• Total interactions analyzed: 6
• Total true interactions: 4
• Strongest Interaction:
  • Chains: C-D
  • Int. Res.: 52
  • Norm. En. per Res.: -3.351
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-26.1749	-17.9041	-115.217	-159.2959	53	4	5	4969	1	13	13
A-C	0.0	0.0	-3.4259	-3.4259	11	0	0	309	0	0	4
A-D	-19.1021	-7.2769	-87.6989	-114.0779	43	9	0	3770	0	9	23
C-D	-30.4407	-32.686	-111.126	-174.2527	52	6	5	4876	2	12	14

Interface residues

• A-B: ALA33A, ALA61A, ARG20B, ARG25A, ARG25B, ARG32A, ARG32B, ARG39A, ARG44B, ARG55A, ARG72B, ARG77B, ASN35A, ASN35B, ASN50A, ASP56A, ASP64A, ASP71B, GLN29B, GLN70B, GLU27B, GLU68B, GLY22B, GLY28B, GLY34A, GLY52A, GLY54A, GLY73B, ILE36A, ILE36B, LEU21B, LEU37A, LEU37B, LEU59A, LEU62A, LYS24B, LYS49A, MET53A, PHE45B, PHE57A, PHE60A, PHE69B, THR58A, TYR26B, VAL23B, VAL30B, VAL31B, VAL38A, VAL38B, VAL63A, VAL66B, VAL67B, VAL79B
• A-C: ARG20C, ARG74A, GLY22C, GLY76A, LEU21C, LEU75A, LYS24C, LYS46A, THR43A, TYR78A, VAL23C
• A-D: ARG41D, ARG44D, ARG55D, ARG72A, ARG72D, ARG74A, ARG74D, ARG77A, ARG77D, ASN50D, ASP71A, GLN40D, GLN70A, GLU27A, GLU68A, GLY42D, GLY48D, GLY52D, GLY54D, GLY73A, GLY76A, GLY76D, HIS80A, HIS80D, LEU59D, LEU62D, LEU75A, LEU75D, LYS46D, LYS49A, LYS49D, MET53D, PHE45D, PHE57D, PHE60D, PHE69A, PRO47D, THR43D, THR58D, TYR78A, TYR78D, VAL51D, VAL79D
• C-D: ALA33D, ALA61D, ARG20C, ARG25C, ARG25D, ARG32C, ARG32D, ARG39D, ARG44C, ARG55D, ARG77C, ASN35C, ASN35D, ASN50D, ASP56D, ASP64D, ASP71C, GLN29C, GLN70C, GLU27C, GLU68C, GLY22C, GLY28C, GLY34D, GLY52D, GLY54D, GLY65D, ILE36C, ILE36D, LEU21C, LEU37C, LEU37D, LEU59D, LEU62D, LEU84D, LYS24C, MET53D, PHE45C, PHE57D, PHE60D, PHE69C, THR58D, TYR26C, VAL23C, VAL30C, VAL31C, VAL31D, VAL38C, VAL63D, VAL66C, VAL67C, VAL79C