1V4L

crystal structure of a platelet agglutination factor isolated from the venom of taiwan habu (trimeresurus mucrosquamatus)

• Total interactions analyzed: 15
• Total true interactions: 10
• Strongest Interaction:
  • Chains: A-D
  • Int. Res.: 29
  • Norm. En. per Res.: -3.3276
• Hub Node: A(4)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-99.8839	-53.4853	143.103	-10.2662	139	53	7	21402	5	39	35
A-C	-4.708	0.0	-65.4019	-70.1099	36	4	0	2719	0	8	9
A-D	-23.1037	-39.1716	-34.2242	-96.4995	29	2	0	1324	7	15	17
A-F	-8.3266	0.9457	-26.7978	-34.1787	23	0	0	1252	0	5	10
B-C	-10.3293	-35.1961	-35.3444	-80.8698	28	2	0	1418	4	16	17
B-D	0.0	0.0	-0.4736	-0.4736	11	0	0	46	0	4	4
B-E	-12.5215	1.6827	-34.4775	-45.3164	28	1	0	1437	0	5	8
B-F	0.0	0.0	-0.686	-0.686	8	0	0	129	0	4	1
C-D	-127.3544	-57.6901	233.601	48.5565	141	67	7	21672	1	41	39
E-F	-75.1736	-48.4175	141.047	17.4559	137	59	6	21641	3	38	37

Interface residues

• A-B: ALA106A, ALA278B, ALA291B, ALA88A, ARG114A, ARG13A, ARG73A, ARG82A, ASN118A, ASN272B, ASN275B, ASN306B, ASN76A, ASN92A, ASN95A, ASP251B, ASP283B, ASP288B, ASP297B, ASP312B, ASP51A, ASP87A, CYS104A, CYS129A, CYS232B, CYS277B, CYS298B, CYS313B, CYS32A, CYS81A, GLN295B, GLN307B, GLN324B, GLN75A, GLN79A, GLN80A, GLN99A, GLU229B, GLU248B, GLU249B, GLU276B, GLU280B, GLU29A, GLU33A, GLU45A, GLU49A, GLU78A, GLU84A, GLU94A, GLY238B, GLY269B, GLY284B, GLY294B, GLY48A, GLY50A, GLY71A, HIS214B, HIS240B, HIS245B, HIS40A, ILE299B, ILE44A, ILE70A, ILE74A, LEU107A, LEU241B, LEU270B, LEU287B, LEU309B, LEU41A, LEU72A, LEU96A, LYS102A, LYS103A, LYS108A, LYS130A, LYS279B, LYS286B, LYS290B, LYS302B, LYS322B, LYS77A, LYS98A, MET268B, MET311B, PHE117A, PHE244B, PHE265B, PHE323B, SER100A, SER101A, SER239B, SER243B, SER246B, SER247B, SER271B, SER282B, SER293B, SER296B, SER301B, SER310B, SER39A, SER43A, SER46A, SER47A, SER83A, SER86A, SER89A, SER90A, THR111A, THR115A, THR132A, THR233B, THR285B, THR300B, THR38A, TRP116A, TRP225B, TRP25A, TRP267B, TRP274B, TRP281B, TRP292B, TRP308B, TRP85A, TYR105A, TYR120A, TYR131A, TYR14A, TYR289B, TYR67A, TYR93A, TYR97A, VAL119A, VAL242B, VAL250B, VAL273B, VAL42A, VAL91A
• A-C: ARG82A, ARG82C, ASN76A, ASN76C, ASN92A, ASN92C, ASN95A, ASN95C, CYS81A, CYS81C, GLN79A, GLN79C, GLN80A, GLN80C, GLU78A, GLU78C, GLU84A, GLU84C, GLU94A, GLU94C, LYS103A, LYS103C, LYS77A, LYS77C, SER83A, SER83C, SER89A, SER89C, SER90A, SER90C, TRP85A, TRP85C, TYR93A, TYR93C, VAL91A, VAL91C
• A-D: ARG73A, ASN76A, ASP212D, GLN324D, GLN75A, GLN79A, GLU213D, GLU249D, GLU26A, GLU29A, GLU33A, GLU78A, GLU94A, GLY201D, HIS214D, HIS245D, HIS40A, ILE74A, LYS103A, LYS322D, LYS77A, PHE202D, PHE244D, SER243D, SER246D, SER30A, TRP25A, TYR211D, TYR216D
• A-F: ARG114A, GLN220F, GLN221F, GLN234F, GLN235F, GLU112A, GLY110A, ILE260F, LEU113A, LEU261F, LYS108A, LYS109A, LYS222F, LYS262F, LYS316F, MET223F, PHE117A, PHE219F, PHE231F, PHE65A, SER64A, THR111A, TYR318F
• B-C: ARG73C, ASN76C, ASP212B, GLN324B, GLN75C, GLN79C, GLU213B, GLU248B, GLU249B, GLU29C, GLU33C, GLU78C, GLU94C, GLY201B, HIS214B, HIS245B, ILE74C, LYS103C, LYS322B, LYS77C, LYS98C, PHE244B, SER246B, SER247B, SER30C, TRP25C, TYR211B, TYR216B
• B-D: GLN324B, GLN324D, GLU213B, GLU280B, GLU280D, GLY201D, GLY284B, GLY284D, PHE202B, PHE202D, SER282B
• B-E: ALA58E, ARG114E, GLN220B, GLN221B, GLN234B, GLN235B, GLN66E, GLU112E, GLY110E, ILE260B, LEU113E, LEU261B, LYS108E, LYS109E, LYS222B, LYS262B, LYS316B, LYS62E, MET223B, PHE117E, PHE219B, PHE231B, PHE65E, SER64E, THR111E, THR63E, TYR318B, VAL319B
• B-F: ASP312B, ASP312F, GLN295B, GLN295F, LYS316B, LYS316F, SER314B, SER314F
• C-D: ALA106C, ALA278D, ALA291D, ALA88C, ARG114C, ARG13C, ARG73C, ARG82C, ASN118C, ASN272D, ASN275D, ASN306D, ASN76C, ASN92C, ASN95C, ASP251D, ASP283D, ASP288D, ASP297D, ASP305D, ASP312D, ASP51C, ASP87C, CYS104C, CYS232D, CYS277D, CYS298D, CYS313D, CYS32C, CYS81C, GLN295D, GLN307D, GLN324D, GLN75C, GLN79C, GLN80C, GLN99C, GLU229D, GLU248D, GLU249D, GLU26C, GLU276D, GLU280D, GLU29C, GLU33C, GLU45C, GLU49C, GLU78C, GLU84C, GLU94C, GLY238D, GLY269D, GLY284D, GLY294D, GLY48C, GLY50C, GLY71C, HIS214D, HIS240D, HIS245D, HIS40C, ILE299D, ILE44C, ILE70C, ILE74C, LEU107C, LEU113C, LEU241D, LEU270D, LEU287D, LEU309D, LEU41C, LEU72C, LEU96C, LYS102C, LYS103C, LYS108C, LYS130C, LYS279D, LYS286D, LYS290D, LYS302D, LYS322D, LYS77C, LYS98C, MET268D, MET311D, PHE117C, PHE244D, PHE323D, SER100C, SER101C, SER239D, SER243D, SER246D, SER247D, SER271D, SER282D, SER293D, SER296D, SER301D, SER310D, SER39C, SER43C, SER46C, SER47C, SER83C, SER86C, SER89C, SER90C, THR111C, THR115C, THR132C, THR233D, THR285D, THR300D, THR38C, TRP116C, TRP225D, TRP25C, TRP267D, TRP274D, TRP281D, TRP292D, TRP308D, TRP69C, TRP85C, TYR105C, TYR120C, TYR131C, TYR14C, TYR289D, TYR67C, TYR93C, TYR97C, VAL119C, VAL242D, VAL250D, VAL273D, VAL42C, VAL91C
• E-F: ALA106E, ALA278F, ALA291F, ALA88E, ARG114E, ARG13E, ARG73E, ARG82E, ASN118E, ASN272F, ASN275F, ASN306F, ASN76E, ASN92E, ASN95E, ASP251F, ASP283F, ASP288F, ASP297F, ASP312F, ASP51E, ASP87E, CYS104E, CYS232F, CYS277F, CYS298F, CYS32E, CYS81E, GLN295F, GLN307F, GLN324F, GLN75E, GLN79E, GLN80E, GLN99E, GLU229F, GLU248F, GLU249F, GLU276F, GLU280F, GLU29E, GLU33E, GLU45E, GLU49E, GLU78E, GLU84E, GLU94E, GLY238F, GLY269F, GLY284F, GLY294F, GLY48E, GLY50E, GLY71E, HIS214F, HIS240F, HIS245F, HIS40E, ILE299F, ILE44E, ILE70E, ILE74E, LEU107E, LEU241F, LEU270F, LEU287F, LEU309F, LEU41E, LEU72E, LEU96E, LYS102E, LYS103E, LYS108E, LYS130E, LYS279F, LYS286F, LYS290F, LYS302F, LYS322F, LYS37E, LYS77E, LYS98E, MET268F, MET311F, PHE117E, PHE244F, PHE323F, SER100E, SER101E, SER239F, SER243F, SER246F, SER247F, SER271F, SER282F, SER293F, SER296F, SER301F, SER310F, SER39E, SER43E, SER46E, SER47E, SER83E, SER86E, SER89E, SER90E, THR111E, THR115E, THR132E, THR233F, THR285F, THR300F, THR38E, TRP116E, TRP225F, TRP25E, TRP267F, TRP274F, TRP281F, TRP292F, TRP308F, TRP69E, TRP85E, TYR105E, TYR131E, TYR14E, TYR289F, TYR67E, TYR93E, TYR97E, VAL119E, VAL242F, VAL250F, VAL273F, VAL42E, VAL91E