1UVI

the structural basis for rna specificity and ca2 inhibition of an rna-dependent rna polymerase phi6p2 with 6nt rna

• Total interactions analyzed: 15
• Total true interactions: 2
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 105
  • Norm. En. per Res.: -1.8632
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-14.0209	-39.531	-142.083	-195.6348	105	14	2	6422	6	41	40
A-C	0.0	-19.8958	-90.2711	-110.1669	74	8	2	4601	0	24	20

Interface residues

• A-B: ALA36A, ALA36B, ALA578A, ALA578B, ALA585A, ALA585B, ARG251B, ARG30B, ARG49A, ARG49B, ARG537A, ARG537B, ARG539A, ARG542A, ARG542B, ARG593A, ARG593B, ARG600A, ARG607A, ASN55B, ASN577B, ASP259B, ASP47A, ASP47B, ASP538A, ASP589A, ASP589B, ASP594A, GLN255B, GLN26B, GLN533A, GLN533B, GLN608A, GLU254B, GLU34B, GLU38A, GLU38B, GLU41A, GLU41B, GLU581A, GLU581B, GLU588A, GLU588B, GLU597A, GLY257A, GLY257B, GLY35B, GLY42A, GLY42B, GLY535A, GLY535B, GLY580A, GLY580B, ILE22B, ILE258A, ILE258B, ILE37A, ILE37B, LEU252B, LEU43A, LEU43B, LEU44A, LEU44B, LEU51B, LEU596A, LYS253B, LYS29B, LYS33B, LYS592A, LYS592B, MET590A, MET590B, PHE32B, PHE50B, PHE53B, PHE546A, PHE579A, PHE579B, PHE93B, PRO261B, PRO48A, PRO48B, SER31B, SER45A, SER52B, SER534A, SER534B, THR39A, THR39B, THR595A, TRP575B, TRP576A, TYR256A, TYR256B, TYR40A, TYR40B, TYR586A, TYR586B, TYR601A, VAL46A, VAL46B, VAL532A, VAL532B, VAL536A, VAL536B
• A-C: ALA115A, ALA19C, ALA24C, ALA419A, ALA464A, ARG122A, ARG169C, ARG425A, ARG463A, ARG470A, ASN124A, ASN20C, ASN21C, ASN423A, ASP113A, ASP116A, ASP11C, ASP123A, ASP187C, ASP188C, ASP416A, ASP428A, GLN15C, GLN191C, GLN194C, GLN25C, GLN26C, GLU121A, GLU165C, GLY117A, GLY467A, HIS193C, HIS417A, HIS421A, ILE12C, ILE22C, ILE426A, LEU114A, LEU125A, LEU126A, LEU192C, LEU415A, LEU422A, LEU9C, LYS13C, LYS173C, LYS23C, LYS29C, LYS427A, LYS479A, MET16C, MET413A, PHE127A, PHE18C, PRO118A, PRO420A, PRO482A, PRO484A, SER10C, SER120A, SER28C, SER424A, SER431A, SER483A, THR162C, THR409A, THR418A, TYR155C, TYR190C, TYR485A, VAL119A, VAL412A, VAL466A, VAL480A