1UAD

crystal structure of the rala-gppnhp-sec5 ral-binding domain complex

• Total interactions analyzed: 6
• Total true interactions: 5
• Strongest Interaction:
  • Chains: A-C
  • Int. Res.: 65
  • Norm. En. per Res.: -4.637
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-30.0644	17.442	-87.2692	-99.8916	58	4	1	3620	5	40	42
A-C	-70.1862	-57.1816	-174.038	-301.4058	65	8	1	6287	4	22	11
A-D	-39.4579	-28.1804	-58.2594	-125.8977	36	9	0	2571	2	11	8
B-C	-14.1311	-10.7264	-84.5048	-109.3622	39	3	0	3017	2	14	9
B-D	-50.4303	-50.8068	-153.71	-254.9471	58	11	1	5703	4	23	12

Interface residues

• A-B: ALA158B, ALA162A, ALA162B, ARG161A, ARG161B, ARG173A, ARG173B, ASN163A, ASN163B, ASP130A, ASP130B, ASP165A, ASP165B, ASP37A, ASP37B, ASP58A, ASP58B, GLN33A, GLN33B, GLU155A, GLU155B, GLU38A, GLU38B, GLY59A, GLY59B, LEU57A, LEU57B, LYS159A, LYS159B, LYS166A, LYS166B, LYS53A, LYS53B, MET35A, MET35B, PHE169A, PHE169B, PHE34A, PHE34B, PHE39A, PHE39B, SER129A, SER129B, SER157A, SER157B, THR156A, THR156B, THR160A, THR160B, TYR36A, TYR36B, VAL154A, VAL164A, VAL164B, VAL55A, VAL55B, VAL56A, VAL56B
• A-C: ALA48A, ARG27C, ARG52A, ASN16C, ASN81A, ASP37A, ASP42A, ASP49A, ASP65A, ASP68A, GLN33A, GLN63A, GLU17C, GLU29C, GLU38A, GLU44A, GLY12C, GLY18C, GLY28C, ILE13C, ILE19C, ILE26C, ILE64A, ILE66A, ILE74C, ILE78A, LEU14A, LEU31C, LEU32A, LEU67A, LEU93C, LEU9C, LYS23C, LYS47A, LYS53A, LYS54A, LYS59C, LYS91C, MET35A, PHE90C, PRO15C, PRO45A, SER14C, SER50A, SER56C, SER58C, SER85A, SER86C, SER89C, THR11C, THR22C, THR25C, THR31A, THR46A, THR69A, THR87C, TYR36A, TYR51A, TYR75A, TYR82A, VAL10C, VAL24C, VAL40A, VAL61C, VAL88C
• A-D: ALA13A, ALA57D, ARG176A, ARG27D, ARG5D, ASN30D, ASP37D, ASP58A, GLN6D, GLU29D, GLU60A, GLU61A, GLY28D, GLY32D, GLY34D, GLY59A, LEU12A, LEU31D, LEU57A, LEU9D, LYS54A, LYS59D, MET180A, PRO7D, PRO8D, SER11A, SER4D, SER56D, SER58D, SER80D, THR11D, THR33D, TRP54D, VAL55A, VAL56A, VAL62A
• B-C: ALA13B, ALA57C, ARG176B, ARG27C, ARG5C, ASN30C, ASP182B, ASP37C, ASP58B, GLN63B, GLN6C, GLU181B, GLU29C, GLU60B, GLU61B, GLY28C, GLY32C, GLY34C, GLY59B, LEU12B, LEU31C, LEU57B, LEU9C, LYS54B, LYS59C, PRO7C, PRO8C, SER11B, SER183B, SER4C, SER56C, SER58C, SER80C, THR11C, THR33C, TRP54C, VAL55B, VAL56B, VAL62B
• B-D: ALA48B, ARG27D, ARG52B, ASN16D, ASN81B, ASP37B, ASP49B, ASP65B, ASP68B, GLN63B, GLU17D, GLU29D, GLU38B, GLU44B, GLY12D, GLY28D, ILE13D, ILE26D, ILE64B, ILE66B, ILE74D, ILE78B, LEU14B, LEU31D, LEU32B, LEU67B, LEU93D, LEU9D, LYS47B, LYS53B, LYS54B, LYS59D, LYS71D, LYS91D, MET35B, PHE90D, PRO15D, PRO45B, SER14D, SER28B, SER50B, SER56D, SER58D, SER86D, SER89D, THR11D, THR22D, THR25D, THR31B, THR46B, THR69B, THR87D, TYR36B, TYR51B, TYR82B, VAL10D, VAL40B, VAL88D