1TWF
rna polymerase ii complexed with utp at 2.3 a resolution
Total interactions analyzed 45
Total true interactions 23
Strongest Interaction Chains B-C
Int. Res. 161
Norm. En. per Res. -4.3899
Hub Node B(8)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -385.0171 -80.2139 -2429.28 -2894.511 714 150 57 99378 13 234 216
A-C -10.6286 7.1317 -60.4888 -63.9856 51 4 0 2762 0 19 18
A-E -93.2768 -79.3893 -603.987 -776.6532 229 50 15 25783 5 92 68
A-F -71.5929 -28.9935 -482.326 -582.9124 172 29 14 20071 2 62 58
A-H -63.5532 -12.5037 -437.056 -513.1128 149 39 14 18343 2 37 34
A-I -116.1614 -16.571 -422.085 -554.8175 141 37 9 16797 3 55 50
A-K -36.8012 -35.0561 -287.436 -359.2933 92 22 7 10572 2 22 19
B-C -99.0967 -107.9611 -499.722 -706.7798 161 42 4 17890 6 55 61
B-E 0.0 0.0 -6.5379 -6.5379 7 1 0 295 0 1 3
B-F 0.0 -1.0053 -16.3572 -17.3625 28 1 0 848 0 7 10
B-H 0.0 0.0 -0.1277 -0.1277 2 0 0 27 0 0 0
B-I -43.5239 -55.2016 -306.326 -405.0515 143 24 2 14001 3 46 49
B-J -45.5855 -16.6236 -424.773 -486.9821 137 36 7 18595 2 36 38
B-K -5.6584 -28.2492 -83.2523 -117.1598 56 8 0 3161 3 16 19
B-L -68.9814 -46.4762 -212.765 -328.2225 107 23 7 10360 8 48 43
C-H -5.9968 -11.1856 -31.48 -48.6624 25 1 1 1388 1 8 5
C-J -48.8295 -22.7034 -232.417 -303.9499 111 21 10 12130 7 38 26
C-K -55.2427 -58.4862 -499.423 -613.1519 152 42 17 22865 6 44 46
C-L -40.9918 -43.6779 -146.582 -231.2517 57 11 8 5915 7 22 16
E-F -13.1069 -24.9999 -17.9031 -56.0099 21 3 0 1017 1 5 5
H-K 0.0 -8.3305 -31.0656 -39.3961 27 3 0 1712 0 5 5
J-L 0.0 0.0 -2.1639 -2.1639 8 0 0 245 0 0 1
K-L 0.0 7.4574 -1.9781 5.4793 5 0 0 240 0 3 2