1TWA
rna polymerase ii complexed with atp
Total interactions analyzed 45
Total true interactions 23
Strongest Interaction Chains B-C
Int. Res. 160
Norm. En. per Res. -4.4122
Hub Node B(8)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -422.3745 21.1898 -2170.17 -2571.3547 674 103 52 90697 11 209 191
A-C -7.5792 7.0155 -63.8197 -64.3834 54 0 0 2783 0 16 17
A-E -78.6179 -89.831 -568.186 -736.6348 230 25 15 25483 6 89 65
A-F -63.9171 -33.9231 -463.425 -561.2652 167 17 14 19530 3 62 58
A-H -58.9145 -6.699 -327.757 -393.3705 148 68 12 18432 1 38 37
A-I -99.3774 -12.6146 -412.112 -524.1039 137 29 9 16716 2 53 52
A-K -30.9106 -56.1603 -216.261 -303.3318 90 32 7 9978 3 22 19
B-C -106.4204 -115.1302 -484.399 -705.9496 160 25 5 17782 7 56 62
B-E 0.0 0.0 -0.9015 -0.9015 6 0 0 118 0 1 4
B-F -6.6568 -2.3055 -20.4148 -29.3771 27 4 0 1067 0 7 10
B-H 0.0 0.0 -0.2012 -0.2012 2 0 0 30 0 0 0
B-I -29.5402 -57.675 -307.592 -394.8072 140 19 3 13710 2 47 46
B-J -58.559 -12.6125 -426.6 -497.7715 137 11 7 18152 2 37 36
B-K -3.5135 -23.6411 -81.9439 -109.0985 56 5 0 3144 4 17 19
B-L -102.0767 -87.1723 -205.994 -395.243 112 23 6 10964 9 45 44
C-H -6.8632 -8.5014 -27.3359 -42.7005 24 0 1 1358 1 9 6
C-J -41.3499 -53.9655 -236.003 -331.3184 107 13 10 11406 8 37 25
C-K -21.56 -49.7351 -469.54 -540.8351 151 28 15 22173 7 45 45
C-L -48.4522 -31.506 -141.337 -221.2953 59 12 8 5728 7 24 15
E-F -6.2615 -17.0305 -15.0309 -38.3229 22 3 0 926 0 5 6
H-K 0.0 -9.6021 -30.4796 -40.0817 25 0 0 1535 0 5 5
J-L 0.0 0.0 -0.3299 -0.3299 5 0 0 51 0 0 1
K-L 0.0 6.5997 -1.1145 5.4852 5 0 0 192 0 2 2