1THD

complex organization of dengue virus e protein as revealed by 9.5 angstrom cryo-em reconstruction

• Total interactions analyzed: 3
• Total true interactions: 3
• Strongest Interaction:
  • Chains: A-C
  • Int. Res.: 44
  • Norm. En. per Res.: -0.0612
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	0.0	0.0	-0.4091	-0.4091	11	0	0	144	0	0	0
A-C	0.0	0.0	-2.6921	-2.6921	44	0	0	701	0	0	0
B-C	0.0	0.0	-2.0044	-2.0044	54	0	0	474	0	0	0

Interface residues

• A-B: ASP390B, GLN167A, GLU133A, ILE170A, LEU387B, LEU389B, LYS388B, PRO166A, SER168A, SER169A, TRP391B
• A-C: ALA224A, ALA224C, ALA54A, ALA54C, ARG57A, ARG57C, ARG73A, ARG73C, ARG89A, ARG89C, ASN230A, ASN230C, ASN83A, ASN83C, ASP87A, ASP87C, GLN77A, GLN77C, GLN86A, GLN86C, GLU79A, GLU79C, GLU85A, GLU85C, GLY223A, GLY223C, GLY78A, GLY78C, LEU56A, LEU56C, LEU82A, LEU82C, LYS88A, LYS88C, PRO222A, PRO222C, PRO80A, PRO80C, SER229A, SER229C, THR55A, THR55C, THR81A, THR81C
• B-C: ALA259B, ALA259C, ALA313B, ALA313C, ARG99B, ASN153B, ASN153C, ASP154B, ASP154C, ASP98B, ASP98C, GLN256B, GLN256C, GLN316B, GLN316C, GLU257B, GLU257C, GLU314B, GLY100B, GLY100C, GLY102B, GLY102C, GLY109B, GLY109C, GLY152B, GLY152C, GLY254B, GLY254C, GLY258B, GLY258C, GLY28B, GLY28C, GLY5B, GLY5C, HIS244B, HIS244C, HIS261B, HIS261C, ILE6B, ILE6C, LEU107B, LEU107C, LEU253B, LEU253C, PHE108B, PHE108C, SER255B, SER255C, SER7C, THR262C, THR315B, THR315C, TRP101B, TRP101C