1TC5

structural analysis of a probable eukaryotic d-amino acid trna deacylase

• Total interactions analyzed: 6
• Total true interactions: 4
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 145
  • Norm. En. per Res.: -2.9871
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-128.5175	-54.7569	-249.854	-433.1284	145	35	7	17376	2	34	48
A-C	-13.3255	-26.6963	-28.2876	-68.3095	26	5	0	1399	4	15	12
A-D	0.0	-5.8528	-27.3287	-33.1815	45	1	0	1677	0	35	29
B-D	0.0	28.9693	-16.4816	12.4877	4	0	0	313	0	2	2

Interface residues

• A-B: ALA100A, ALA100B, ALA17A, ALA17B, ALA43A, ALA43B, ARG109A, ARG109B, ARG12A, ARG12B, ARG177A, ARG177B, ARG181A, ARG181B, ASN176A, ASN176B, ASP193A, ASP193B, ASP19A, ASP19B, GLN112A, GLN112B, GLN115A, GLN115B, GLN16A, GLN16B, GLN178A, GLN178B, GLN20A, GLN20B, GLN84A, GLN84B, GLN99A, GLN99B, GLU183A, GLU183B, GLU185A, GLU185B, GLU87A, GLU87B, GLY103A, GLY103B, GLY104A, GLY104B, GLY108A, GLY108B, GLY179A, GLY179B, GLY186A, GLY186B, GLY21A, GLY21B, GLY63A, GLY63B, HIS190A, HIS190B, HIS22A, HIS22B, HIS60A, HIS60B, HIS67A, HIS67B, HIS73A, HIS73B, ILE194A, ILE194B, ILE42A, ILE42B, ILE70A, ILE70B, LEU102A, LEU102B, LEU116A, LEU116B, LEU15A, LEU15B, LEU180A, LEU180B, LEU23A, LEU23B, LEU24A, LEU24B, LEU45A, LEU45B, LEU65A, LEU65B, LEU66A, LEU66B, LYS105A, LYS105B, LYS107A, LYS107B, LYS69A, LYS69B, MET14A, MET14B, MET191A, MET191B, MET39A, MET39B, PHE113A, PHE113B, PHE182A, PHE182B, PHE188A, PHE188B, PHE192A, PHE192B, PHE71A, PHE71B, PRO187A, PRO187B, PRO83A, PRO83B, PRO98A, PRO98B, SER101A, SER101B, SER110A, SER110B, SER184A, SER184B, SER85A, SER85B, THR189A, THR189B, THR68A, THR68B, THR72A, THR72B, TYR31A, TYR31B, TYR41A, TYR41B, VAL106A, VAL106B, VAL111A, VAL111B, VAL13A, VAL13B, VAL28B, VAL64A, VAL64B, VAL97A, VAL97B
• A-C: ALA156C, ALA159C, ARG109A, ARG143C, ARG151C, ARG48A, ASP155C, ASP29C, ASP47A, ASP49A, GLN112A, GLN115A, GLU153C, GLY108A, GLY154C, HIS114A, LYS105A, LYS107A, PHE113A, PRO150C, SER110A, SER142C, SER152C, SER46A, VAL106A, VAL111A
• A-D: ALA136A, ALA156D, ARG128A, ARG134A, ARG137A, ARG143D, ARG168D, ARG36D, ARG59A, ASN166D, ASP155D, CYS89A, CYS89D, GLU141A, GLU77D, GLU87A, GLU88A, GLU88D, GLU91A, GLU91D, GLY138A, GLY154D, HIS131A, HIS67A, ILE163D, LEU66A, LYS158D, LYS164D, LYS69A, LYS78A, LYS78D, PHE132A, PRO157D, PRO76D, PRO90A, PRO90D, SER152D, SER167A, SER85A, TRP162D, TYR165D, VAL133A, VAL135A, VAL139A, VAL62A
• B-D: ARG109B, ARG143D, ASP140D, SER142D