1SL2

ternary 5' complex of t7 dna polymerase with a dna primer/template containing a cis-syn thymine dimer on the template and an incoming nucleotide

• Total interactions analyzed: 6
• Total true interactions: 1
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 99
  • Norm. En. per Res.: -3.918
• Hub Node: A(1)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-88.2392	-2.556	-297.088	-387.8832	99	17	14	12155	0	11	21

Interface residues

• A-B: ALA105B, ALA29B, ALA322A, ALA324A, ALA67B, ALA87B, ALA88B, ALA93B, ARG278A, ARG288A, ARG318A, ARG73B, ASN106B, ASN63B, ASP104B, ASP316A, ASP61B, CYS275A, CYS32B, CYS35B, GLN266A, GLN98B, GLU101B, GLU30B, GLU319A, GLU330A, GLU348A, GLY262A, GLY295A, GLY296A, GLY323A, GLY33B, GLY65B, GLY71B, GLY74B, GLY92B, GLY97B, HIS276A, HIS331A, ILE289A, ILE297A, ILE38B, ILE60B, ILE72B, ILE75B, LEU103B, LEU107B, LEU283A, LEU315A, LEU58B, LEU78B, LEU79B, LEU80B, LEU94B, LEU99B, LYS100B, LYS268A, LYS285A, LYS290A, LYS344A, LYS345A, LYS36B, LYS69B, LYS90B, MET37B, PHE102B, PHE261A, PHE274A, PHE27B, PRO267A, PRO277A, PRO287A, PRO292A, PRO325A, PRO328A, PRO34B, PRO64B, PRO68B, PRO76B, SER263A, SER95B, THR291A, THR317A, THR327A, THR66B, THR77B, THR89B, TRP264A, TRP31B, TYR265A, TYR286A, TYR320A, TYR326A, TYR70B, VAL294A, VAL321A, VAL329A, VAL332A, VAL91B