1SFO
rna polymerase ii strand separated elongation complex
Total interactions analyzed 66
Total true interactions 22
Strongest Interaction Chains C-L
Int. Res. 58
Norm. En. per Res. -3.9526
Hub Node A(7)
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Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -370.1793 -226.9411 -2267.06 -2864.1803 752 291 62 107741 18 266 238
A-C -7.0167 1.9087 -59.4097 -64.5176 54 13 0 3175 0 15 16
A-E -88.6934 -54.9926 -484.803 -628.489 200 69 16 22968 7 76 67
A-F -35.5455 -49.9818 -369.818 -455.3452 155 38 13 17968 0 46 39
A-H -66.6051 -13.1695 -343.116 -422.8906 141 43 11 17170 0 36 34
A-I -81.9455 -41.6622 -394.224 -517.8317 145 36 9 16908 5 55 52
A-K -28.0166 -32.024 -213.938 -273.9786 87 18 7 9901 1 23 22
B-C -66.4029 -112.1252 -423.058 -601.5861 166 59 5 17588 7 54 59
B-F 0.0 0.0 -7.9567 -7.9567 18 1 0 417 0 4 6
B-H 0.0 0.0 -0.7708 -0.7708 2 0 0 54 0 0 0
B-I -15.0816 -47.615 -250.904 -313.6006 132 35 2 13569 2 51 47
B-J -26.3267 -14.4422 -374.579 -415.3479 138 58 7 17843 4 36 37
B-K -6.7469 -21.6001 -55.1802 -83.5273 56 11 0 2984 3 16 17
B-L -79.5338 -64.0831 -189.935 -333.5519 106 35 9 10844 9 45 43
C-H 0.0 -9.4689 -23.3525 -32.8214 24 0 1 1244 1 9 5
C-J -60.1724 -50.722 -186.512 -297.4064 113 45 11 12220 5 41 28
C-K -23.0914 -39.7152 -462.767 -525.5737 149 40 15 22475 5 47 43
C-L -49.6577 -48.9856 -130.608 -229.2513 58 15 9 5560 5 24 15
E-F -9.6954 -23.0081 -18.2939 -50.9974 21 2 0 1091 1 5 6
H-K 0.0 0.0 -22.0966 -22.0966 25 1 0 1521 0 6 5
J-L 0.0 0.0 -3.5339 -3.5339 9 0 0 258 0 0 1
K-L 0.0 6.939 -0.8596 6.0795 5 0 0 188 0 3 2