1SBK

x-ray structure of ydii_ecoli northeast structural genomics consortium target er29.

• Total interactions analyzed: 6
• Total true interactions: 6
• Strongest Interaction:
  • Chains: B-D
  • Int. Res.: 124
  • Norm. En. per Res.: -3.5233
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-28.7905	18.6056	-118.284	-128.4689	59	9	2	5127	0	12	23
A-C	-77.1043	-54.1477	-283.155	-414.407	124	23	7	11149	5	26	16
A-D	0.0	14.3558	-34.4786	-20.1228	36	4	0	2858	1	11	11
B-C	0.0	16.6606	-33.8636	-17.203	34	4	0	2453	0	11	11
B-D	-89.7597	-53.8554	-293.27	-436.8851	124	23	8	11428	4	26	19
C-D	-15.3467	32.5923	-124.227	-106.9814	65	10	6	5663	0	12	21

Interface residues

• A-B: ALA87A, ALA87B, ARG110A, ARG110B, ARG130A, ARG130B, ARG91A, ARG91B, ASN86A, ASN86B, ASN88A, ASN88B, CYS127A, CYS127B, GLN112A, GLN112B, GLN115A, GLN115B, GLU117A, GLU117B, GLU84A, GLU84B, GLY108A, GLY108B, HIS106A, HIS106B, HIS111A, HIS111B, HIS89A, HIS89B, ILE116A, ILE116B, ILE85A, ILE85B, LEU105A, LEU105B, LEU107A, LEU107B, LEU125A, LEU125B, LEU131A, LEU131B, LEU83A, LYS103A, LYS103B, SER128A, SER128B, SER129A, SER129B, THR132A, THR132B, THR133A, THR133B, TRP114A, TRP114B, VAL113A, VAL113B, VAL90A, VAL90B
• A-C: ALA14A, ALA14C, ALA57A, ALA57C, ALA62A, ALA62C, ALA87A, ALA87C, ARG130A, ARG130C, ARG45A, ARG45C, ARG5A, ARG91A, ARG91C, ASN13A, ASN19A, ASN19C, ASN86A, ASN86C, ASN88A, ASN88C, ASP25C, ASP43A, ASP43C, CYS127A, CYS127C, GLN48A, GLN48C, GLN78A, GLU17A, GLU17C, GLU63A, GLU63C, GLU77A, GLU84A, GLU84C, GLY16A, GLY16C, GLY18A, GLY18C, GLY22A, GLY22C, GLY51A, GLY51C, GLY55A, GLY55C, GLY56A, GLY56C, GLY66A, GLY76A, GLY82A, GLY82C, HIS54A, HIS54C, HIS89A, HIS89C, ILE26A, ILE26C, ILE65A, ILE65C, ILE85A, ILE85C, LEU12A, LEU12C, LEU131A, LEU131C, LEU24A, LEU24C, LEU52A, LEU52C, LEU53A, LEU53C, LEU61A, LEU61C, LEU83A, LEU83C, LYS47A, LYS47C, LYS79A, LYS79C, PHE23A, PHE23C, PHE28A, PHE28C, PHE50A, PHE50C, PRO49A, PRO49C, SER128A, SER128C, SER129A, SER129C, SER44A, SER44C, SER58A, SER58C, SER64A, SER64C, SER67A, SER67C, SER92A, SER92C, THR132A, THR132C, THR133C, THR46A, THR46C, TYR71A, TYR71C, VAL21A, VAL21C, VAL59A, VAL59C, VAL60A, VAL60C, VAL68A, VAL68C, VAL80A, VAL80C, VAL81A, VAL81C, VAL90A, VAL90C
• A-D: ALA134A, ALA134D, ARG110A, ARG110D, ARG130A, ARG130D, ASN86A, ASN86D, GLN112A, GLN112D, GLU138A, GLU84A, GLU84D, HIS106A, HIS106D, HIS111A, HIS111D, ILE135A, ILE135D, ILE85A, ILE85D, LEU131A, LEU136A, LEU136D, LEU137A, LEU137D, LEU83A, LEU83D, THR132A, THR132D, THR133A, THR133D, VAL113A, VAL113D, VAL81A, VAL81D
• B-C: ALA134B, ALA134C, ARG110B, ARG110C, ARG130B, ARG130C, ASN86B, ASN86C, GLN112C, GLU138B, GLU138C, GLU84B, GLU84C, HIS106C, HIS111B, HIS111C, ILE135B, ILE135C, ILE85B, ILE85C, LEU136B, LEU136C, LEU137B, LEU137C, LEU83B, LEU83C, THR132B, THR132C, THR133B, THR133C, VAL113B, VAL113C, VAL81B, VAL81C
• B-D: ALA14B, ALA14D, ALA57B, ALA57D, ALA62B, ALA62D, ALA87B, ALA87D, ARG130B, ARG130D, ARG45B, ARG45D, ARG5B, ARG91B, ARG91D, ARG94D, ASN13B, ASN19B, ASN19D, ASN86B, ASN86D, ASN88B, ASN88D, ASP25D, ASP43B, ASP43D, CYS127B, CYS127D, GLN48B, GLN48D, GLN78B, GLU138B, GLU17B, GLU17D, GLU63B, GLU63D, GLU84B, GLU84D, GLY16B, GLY16D, GLY18B, GLY18D, GLY22B, GLY22D, GLY51B, GLY51D, GLY55B, GLY55D, GLY56B, GLY56D, GLY66B, GLY66D, GLY82B, GLY82D, HIS54B, HIS54D, HIS89B, HIS89D, ILE26B, ILE26D, ILE65B, ILE65D, ILE85B, ILE85D, LEU12B, LEU12D, LEU131B, LEU131D, LEU24B, LEU24D, LEU52B, LEU52D, LEU53B, LEU53D, LEU61B, LEU61D, LEU83B, LEU83D, LYS47B, LYS47D, LYS79B, LYS79D, PHE23B, PHE23D, PHE28B, PHE28D, PHE50B, PHE50D, PRO49B, PRO49D, SER128B, SER128D, SER129B, SER129D, SER44B, SER44D, SER58B, SER58D, SER64B, SER64D, SER67B, SER67D, SER92B, SER92D, THR132B, THR132D, THR46B, THR46D, TYR71B, TYR71D, VAL21B, VAL21D, VAL59B, VAL59D, VAL60B, VAL60D, VAL68B, VAL68D, VAL80B, VAL80D, VAL81B, VAL81D, VAL90B, VAL90D
• C-D: ALA87C, ALA87D, ARG130C, ARG130D, ARG91C, ARG91D, ASN86C, ASN86D, ASN88C, ASN88D, CYS126C, CYS126D, CYS127C, CYS127D, GLN112C, GLN112D, GLN115C, GLN115D, GLU117C, GLU117D, GLU84C, GLU84D, GLY108C, GLY108D, HIS106C, HIS106D, HIS111C, HIS111D, HIS89C, HIS89D, ILE116C, ILE116D, ILE85C, ILE85D, LEU105C, LEU105D, LEU107C, LEU107D, LEU125C, LEU125D, LEU131C, LEU131D, LEU83D, LYS103C, LYS103D, PHE119C, PHE119D, PRO104C, PRO104D, SER128C, SER128D, SER129C, SER129D, SER92D, THR132C, THR132D, THR133C, THR133D, TRP114C, TRP114D, VAL113C, VAL113D, VAL59C, VAL90C, VAL90D