1S4F

crystal structure of rna-dependent rna polymerase construct 2 from bovine viral diarrhea virus (bvdv)

• Total interactions analyzed: 6
• Total true interactions: 3
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 229
  • Norm. En. per Res.: -4.6507
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-193.3222	-91.155	-780.533	-1065.0101	229	42	25	32243	7	135	125
A-D	-19.4089	-13.1919	-64.2626	-96.8634	49	3	3	3122	1	18	21
C-D	-119.1286	-124.4901	-748.702	-992.3207	237	65	22	31514	8	137	127

Interface residues

• A-B: ALA158A, ALA221A, ALA221B, ALA222A, ALA222B, ALA260A, ALA260B, ALA392A, ALA392B, ARG105A, ARG105B, ARG127A, ARG127B, ARG130A, ARG130B, ARG132A, ARG132B, ARG157A, ARG157B, ARG170A, ARG170B, ARG252A, ARG399A, ARG399B, ARG94A, ARG94B, ASN109A, ASN109B, ASN111A, ASN111B, ASN117A, ASN117B, ASN133A, ASN229B, ASN400A, ASN400B, ASN97A, ASN97B, ASP126A, ASP126B, ASP161A, ASP161B, ASP171A, ASP171B, ASP174A, ASP174B, ASP382A, ASP382B, ASP393A, ASP393B, GLN107A, GLN107B, GLN124A, GLN124B, GLN159A, GLN159B, GLN288A, GLN288B, GLN359A, GLN359B, GLN402A, GLN402B, GLU123A, GLU123B, GLU128A, GLU128B, GLU151A, GLU167A, GLU167B, GLU177A, GLU177B, GLU226A, GLU226B, GLU232B, GLU258A, GLU258B, GLU281A, GLU281B, GLU291A, GLU291B, GLU386A, GLU386B, GLU395A, GLU395B, GLU535A, GLU95A, GLU95B, GLY108A, GLY108B, GLY119A, GLY119B, GLY129A, GLY129B, GLY223A, GLY223B, GLY394A, GLY394B, GLY401A, GLY401B, HIS166A, HIS166B, HIS383A, HIS383B, HIS96A, HIS96B, ILE100A, ILE100B, ILE104A, ILE104B, ILE134A, ILE134B, ILE169A, ILE169B, ILE173A, ILE173B, ILE254A, ILE254B, ILE261A, ILE261B, ILE380A, ILE390A, ILE390B, ILE398A, ILE398B, ILE93A, ILE93B, LEU101A, LEU101B, LEU110A, LEU110B, LEU116A, LEU116B, LEU121A, LEU121B, LEU125A, LEU125B, LEU225A, LEU225B, LEU278B, LYS102A, LYS102B, LYS103A, LYS103B, LYS113A, LYS113B, LYS114A, LYS114B, LYS120A, LYS120B, LYS131A, LYS131B, LYS163A, LYS163B, LYS172A, LYS172B, LYS175A, LYS175B, LYS227A, LYS227B, LYS228A, LYS228B, LYS253A, LYS253B, LYS255A, LYS255B, LYS98A, LYS98B, MET115A, MET115B, MET384A, MET384B, PHE106A, PHE106B, PHE165A, PHE165B, PHE224A, PHE224B, PRO118A, PRO118B, PRO262A, PRO262B, PRO388A, PRO388B, SER122A, SER122B, SER176A, SER176B, THR112A, THR112B, THR160A, THR160B, THR162A, THR162B, THR164A, THR164B, THR259A, THR259B, THR379A, THR379B, THR381A, THR381B, THR385A, THR385B, THR391A, THR391B, TRP99A, TRP99B, TYR256A, TYR256B, TYR257A, TYR257B, TYR289A, TYR289B, TYR397A, TYR397B, VAL279A, VAL279B, VAL280A, VAL280B, VAL286A, VAL286B, VAL387A, VAL387B, VAL389A, VAL389B, VAL396A, VAL396B, VAL92A, VAL92B
• A-D: ARG439D, ARG597A, ARG651A, ASN337D, ASN438D, ASN509A, ASN644A, ASP508A, ASP586A, ASP664A, CYS427D, GLU190D, GLU338D, GLU428D, GLU601A, GLU641A, GLU642A, GLY431D, GLY457D, GLY643A, GLY658A, HIS659A, ILE662A, LEU458D, LEU660A, LYS187D, LYS435D, LYS456D, LYS461D, LYS465D, LYS592A, LYS648A, LYS665A, PHE426D, PHE437D, PRO433D, PRO663A, SER429D, SER436D, SER507A, SER654A, SER655A, THR430D, THR657A, TRP645A, TYR434D, TYR661A, VAL432D, VAL440D
• C-D: ALA158D, ALA168C, ALA168D, ALA221C, ALA221D, ALA222C, ALA222D, ALA260C, ALA260D, ALA275D, ALA392C, ALA392D, ARG105C, ARG105D, ARG127C, ARG127D, ARG130C, ARG130D, ARG132C, ARG132D, ARG157C, ARG157D, ARG170C, ARG170D, ARG399C, ARG399D, ARG94C, ARG94D, ASN109C, ASN109D, ASN111C, ASN111D, ASN117C, ASN117D, ASN229C, ASN229D, ASN264C, ASN264D, ASN400C, ASN400D, ASN97C, ASN97D, ASP126C, ASP126D, ASP161C, ASP161D, ASP171C, ASP171D, ASP174C, ASP174D, ASP272D, ASP382C, ASP382D, ASP393C, ASP393D, GLN107C, GLN107D, GLN124C, GLN124D, GLN159C, GLN159D, GLN274D, GLN288D, GLN359C, GLN359D, GLN402C, GLN402D, GLU123C, GLU123D, GLU128C, GLU128D, GLU151C, GLU151D, GLU167C, GLU167D, GLU177C, GLU177D, GLU226C, GLU226D, GLU232C, GLU258C, GLU258D, GLU281C, GLU291C, GLU291D, GLU386C, GLU386D, GLU395C, GLU395D, GLU95C, GLU95D, GLY108C, GLY108D, GLY119C, GLY119D, GLY129C, GLY129D, GLY223C, GLY223D, GLY276D, GLY394C, GLY394D, GLY401C, GLY401D, HIS166C, HIS166D, HIS383C, HIS383D, HIS96C, HIS96D, ILE100C, ILE100D, ILE104C, ILE104D, ILE134C, ILE134D, ILE169C, ILE169D, ILE173C, ILE173D, ILE254C, ILE254D, ILE261C, ILE261D, ILE287D, ILE380D, ILE390C, ILE390D, ILE398C, ILE398D, ILE93C, ILE93D, LEU101C, LEU101D, LEU110C, LEU110D, LEU116C, LEU116D, LEU121C, LEU121D, LEU125C, LEU125D, LEU225C, LEU225D, LEU278C, LYS102D, LYS103C, LYS103D, LYS113C, LYS113D, LYS114C, LYS114D, LYS120C, LYS120D, LYS131C, LYS131D, LYS163C, LYS163D, LYS172D, LYS175C, LYS175D, LYS219C, LYS227C, LYS227D, LYS228C, LYS253C, LYS253D, LYS255C, LYS255D, LYS263C, LYS263D, LYS282C, LYS293D, LYS98C, LYS98D, MET115C, MET115D, MET384C, MET384D, PHE106C, PHE106D, PHE165C, PHE165D, PHE224C, PHE224D, PRO118C, PRO118D, PRO262C, PRO262D, PRO388C, PRO388D, SER122C, SER122D, SER176C, SER176D, SER355C, SER533C, THR112C, THR112D, THR160C, THR160D, THR162C, THR162D, THR164C, THR164D, THR259C, THR259D, THR379C, THR379D, THR381D, THR385C, THR385D, THR391C, THR391D, TRP273D, TRP99C, TRP99D, TYR256C, TYR256D, TYR257C, TYR257D, TYR289C, TYR289D, TYR397C, TYR397D, VAL156D, VAL279C, VAL280C, VAL286D, VAL387C, VAL387D, VAL389C, VAL389D, VAL396C, VAL396D, VAL92C, VAL92D