1RZI
crystal structure of human anti-hiv-1 gp120-reactive antibody 47e fab
Total interactions analyzed 120
Total true interactions 40
Strongest Interaction Chains K-L
Int. Res. 182
Norm. En. per Res. -2.4934
Hub Node F(7)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -9.3387 -4.3521 -419.296 -432.9868 188 33 8 17744 0 17 17
A-D 0.0 0.0 -0.0536 -0.0536 4 0 0 21 0 0 0
A-M -105.506 3.8425 -282.092 -383.7555 154 27 8 12818 1 23 30
A-N 0.0 0.0 -17.9169 -17.9169 22 1 0 942 0 1 0
B-M 0.0 0.0 -16.5129 -16.5129 24 0 0 1082 0 1 0
B-N 0.0 2.2262 -24.6611 -22.4349 28 9 0 1364 0 6 9
C-D -37.0623 -5.2972 -414.358 -456.7175 190 36 9 17138 0 19 18
C-H 0.0 0.0 -0.0032 -0.0032 3 0 0 2 0 0 0
C-O -105.6849 10.4189 -239.916 -335.182 150 32 8 11774 0 24 31
C-P 0.0 0.0 -20.4125 -20.4125 27 0 0 1120 0 3 2
D-M 0.0 -9.7913 -15.8038 -25.5952 24 0 0 1057 1 7 10
D-N 0.0 0.0 -60.254 -60.254 48 7 0 2877 0 9 11
D-O 0.0 0.0 -10.2479 -10.2479 21 0 0 731 0 1 0
D-P 0.0 3.0648 -29.0389 -25.9741 25 3 0 1251 0 6 10
E-F -8.3774 -9.1903 -425.172 -442.7397 199 23 9 17598 0 20 16
E-I -57.8157 15.8902 -244.693 -286.6184 152 38 7 12114 2 25 32
E-J 0.0 0.0 -17.1636 -17.1636 24 0 0 1133 0 1 0
E-M -11.9766 -20.2397 -42.4453 -74.6616 34 4 0 2078 0 4 3
F-G 0.0 0.0 -0.0287 -0.0287 4 0 0 16 0 0 0
F-I 0.0 0.0 -10.5869 -10.5869 20 0 0 704 0 1 1
F-J 0.0 4.3989 -15.3717 -10.9728 22 6 0 1048 0 6 10
F-K 0.0 -10.8899 -24.3443 -35.2342 26 0 0 1369 0 7 9
F-L -6.3809 0.0 -48.425 -54.8059 45 8 0 2602 0 9 13
F-N -4.6371 0.0 -6.9474 -11.5845 9 3 0 256 0 0 0
F-P 0.0 0.0 -5.2011 -5.2011 17 0 0 507 0 0 1
G-H 0.0 -7.5141 -357.791 -365.3051 181 28 6 16233 0 15 17
G-K -38.0316 15.1663 -261.542 -284.4073 153 21 8 12179 1 24 30
G-L 0.0 0.0 -11.6723 -11.6723 23 1 0 834 0 1 0
G-O -2.3376 0.0 -48.9967 -51.3343 36 5 1 2589 0 0 1
G-P 0.0 0.0 -0.002 -0.002 2 0 0 2 0 0 0
H-K -7.6375 0.0 -27.9303 -35.5678 26 2 0 1396 0 1 0
H-L 0.0 6.8741 -23.8272 -16.9531 24 3 0 1048 0 7 9
H-O 0.0 0.0 -0.2018 -0.2018 6 0 0 40 0 0 0
I-J -5.0427 -12.2587 -393.703 -411.0044 184 23 8 16954 0 16 16
J-L 0.0 0.0 -13.1975 -13.1975 32 5 0 925 0 3 8
K-L -22.4659 -7.5258 -423.813 -453.8047 182 30 9 17149 0 17 16
K-P 0.0 0.0 -1.2483 -1.2483 3 0 0 101 0 0 0
M-N -19.4591 -5.8129 -418.262 -443.534 187 28 9 17296 0 16 17
N-P -11.9115 0.0 -19.6369 -31.5484 35 4 0 965 0 4 6
O-P -10.2551 -6.1469 -431.787 -448.1889 190 28 8 17919 1 16 17