1RXO

activated spinach rubisco in complex with its substrate ribulose-1,5- bisphosphate and calcium

• Total interactions analyzed: 28
• Total true interactions: 16
• Strongest Interaction:
  • Chains: F-H
  • Int. Res.: 96
  • Norm. En. per Res.: -3.7858
• Hub Node: L(4)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
L-S	-68.0845	4.0044	-486.047	-550.1271	161	23	5	19323	4	46	46
L-B	-25.2938	-31.5321	-103.865	-160.6909	56	9	1	4598	7	24	31
L-H	-31.1309	-31.572	-99.5991	-162.302	56	9	1	4575	7	24	31
L-I	-50.3854	-66.5112	-245.77	-362.6666	96	9	3	9559	5	40	34
S-B	-43.4652	-63.4266	-238.845	-345.7367	96	11	3	9440	5	40	34
S-C	0.0	2.7967	-69.5574	-66.7608	38	9	0	3295	0	6	8
S-I	0.0	2.7894	-71.5826	-68.7932	37	7	0	3347	0	6	7
B-C	-68.0956	4.0082	-486.226	-550.3134	161	23	5	19329	4	46	46
B-E	-23.3383	-31.3511	-100.005	-154.6944	56	9	1	4513	7	24	31
C-E	-35.7325	-66.4563	-242.778	-344.9668	96	10	3	9462	5	40	34
C-F	0.0	2.7541	-67.5107	-64.7566	37	4	0	3240	0	5	7
E-F	-68.0913	4.0102	-485.442	-549.5231	161	23	5	19298	4	46	46
E-H	-25.5692	-31.6098	-101.443	-158.622	56	9	1	4587	7	24	31
F-H	-50.4966	-66.4406	-246.501	-363.4382	96	11	3	9575	5	40	34
F-I	0.0	2.8091	-73.2454	-70.4363	38	10	0	3399	0	6	7
H-I	-68.0851	4.0139	-485.17	-549.2412	161	23	5	19290	4	46	46

Interface residues

• L-S: ALA228L, ALA230L, ALA254L, ALA257L, ALA27S, ALA414L, ALA417L, ALA419L, ALA423L, ALA426L, ALA430L, ALA448L, ALA457L, ARG100S, ARG108S, ARG159L, ARG167L, ARG194L, ARG258L, ARG28S, ARG350L, ARG421L, ARG431L, ARG435L, ARG53S, ARG65S, ASN163L, ASN287L, ASN35S, ASN36S, ASN413L, ASN432L, ASN57S, ASN8S, ASP160L, ASP198L, ASP24S, ASP31S, ASP351L, ASP396L, ASP397L, ASP63S, CYS112S, CYS192L, CYS284L, CYS427L, GLN111S, GLN156L, GLN229L, GLN25S, GLN29S, GLN2S, GLN429L, GLU109S, GLU13S, GLU158L, GLU191L, GLU231L, GLU234L, GLU259L, GLU425L, GLU433L, GLU43S, GLU454L, GLY103S, GLY166L, GLY195L, GLY196L, GLY233L, GLY237L, GLY261L, GLY288L, GLY373L, GLY412L, GLY416L, GLY434L, GLY49S, GLY60S, GLY64S, HIS153L, HIS409L, HIS56S, ILE101S, ILE102S, ILE113S, ILE155L, ILE235L, ILE264L, ILE6S, LEU15S, LEU162L, LEU169L, LEU18S, LEU193L, LEU197L, LEU21S, LEU225L, LEU260L, LEU26S, LEU289L, LEU290L, LEU33S, LEU375L, LEU424L, LEU455L, LEU7S, LEU9S, LYS10S, LYS11S, LYS161L, LYS164L, LYS227L, LYS236L, MET1S, PHE115S, PHE199L, PHE256L, PHE50S, PRO168L, PRO19S, PRO20S, PRO263L, PRO410L, PRO415L, PRO453L, PRO59S, PRO5S, SER114S, SER16S, SER452L, SER58S, THR14S, THR22S, THR232L, TRP38S, TRP411L, TRP451L, TRP4S, TRP67S, TYR12S, TYR165L, TYR17S, TYR190L, TYR226L, TYR283L, TYR32S, TYR52S, TYR61S, TYR62S, TYR66S, VAL110S, VAL157L, VAL255L, VAL262L, VAL265L, VAL30S, VAL3S, VAL418L, VAL422L, VAL428L, VAL51S
• L-B: ALA182B, ARG159L, ARG187B, ARG213B, ARG215B, ARG217B, ARG258L, ARG285L, ASN163L, ASN184B, ASN287L, ASP160L, ASP216B, ASP286L, CYS284L, GLN149L, GLN156L, GLN209B, GLU158L, GLU223B, GLU259B, GLY150L, GLY288L, HIS153L, HIS282L, LEU162L, LEU180B, LEU219B, LEU260B, LEU289L, LYS146L, LYS161L, LYS164L, LYS183B, LYS252B, MET212B, PHE148L, PHE211B, PHE220B, PHE256B, PRO151L, PRO152L, PRO210B, PRO372L, SER181B, SER208B, SER370L, THR371L, TRP214B, TRP368L, TYR165L, TYR185B, TYR283L, VAL157L, VAL255B, VAL369L
• L-H: ALA182L, ARG159H, ARG187L, ARG213L, ARG215L, ARG217L, ARG258H, ARG285H, ASN163H, ASN184L, ASN287H, ASP160H, ASP216L, ASP286H, CYS284H, GLN149H, GLN156H, GLN209L, GLU158H, GLU223L, GLU259L, GLY150H, GLY288H, HIS153H, HIS282H, LEU162H, LEU180L, LEU219L, LEU260L, LEU289H, LYS146H, LYS161H, LYS164H, LYS183L, LYS252L, MET212L, PHE148H, PHE211L, PHE220L, PHE256L, PRO151H, PRO152H, PRO210L, PRO372H, SER181L, SER208L, SER370H, THR371H, TRP214L, TRP368H, TYR165H, TYR185L, TYR283H, VAL157H, VAL255L, VAL369H
• L-I: ALA182L, ALA188L, ALA222L, ALA224L, ALA228L, ALA230L, ALA257L, ALA414L, ARG100I, ARG108I, ARG187L, ARG194L, ARG215L, ARG217L, ARG258L, ARG53I, ARG65I, ASN107I, ASN184L, ASN413L, ASN57I, ASP105I, ASP216L, ASP47I, ASP63I, CYS112I, CYS221L, CYS41I, GLN111I, GLN229L, GLU109I, GLU191L, GLU223L, GLU231L, GLU259L, GLU43I, GLU45I, GLU54I, GLY103I, GLY179L, GLY186L, GLY261L, GLY408L, GLY412L, GLY416L, GLY60I, GLY64I, HIS409L, HIS48I, HIS55I, HIS56I, ILE102I, ILE113I, LEU178L, LEU180L, LEU219L, LEU225L, LEU260L, LEU407L, LEU42I, LEU72I, LYS183L, LYS227L, LYS71I, MET69I, PHE104I, PHE211L, PHE218L, PHE220L, PHE256L, PHE44I, PRO410L, PRO415L, PRO59I, PRO73I, SER106I, SER114I, SER181L, SER58I, THR46I, THR68I, TRP411L, TRP67I, TRP70I, TYR185L, TYR190L, TYR226L, TYR52I, TYR61I, TYR62I, TYR66I, TYR94I, VAL110I, VAL189L, VAL262L, VAL51I
• S-B: ALA182B, ALA188B, ALA222B, ALA224B, ALA228B, ALA230B, ALA257B, ALA414B, ARG100S, ARG108S, ARG187B, ARG194B, ARG215B, ARG217B, ARG258B, ARG53S, ARG65S, ASN107S, ASN184B, ASN413B, ASN57S, ASP105S, ASP216B, ASP47S, ASP63S, CYS112S, CYS221B, CYS41S, GLN111S, GLN229B, GLU109S, GLU191B, GLU223B, GLU231B, GLU259B, GLU43S, GLU45S, GLU54S, GLY103S, GLY179B, GLY186B, GLY261B, GLY408B, GLY412B, GLY416B, GLY60S, GLY64S, HIS409B, HIS48S, HIS55S, HIS56S, ILE102S, ILE113S, LEU178B, LEU180B, LEU219B, LEU225B, LEU260B, LEU407B, LEU42S, LEU72S, LYS183B, LYS227B, LYS71S, MET69S, PHE104S, PHE211B, PHE218B, PHE220B, PHE256B, PHE44S, PRO410B, PRO415B, PRO59S, PRO73S, SER106S, SER114S, SER181B, SER58S, THR46S, THR68S, TRP411B, TRP67S, TRP70S, TYR185B, TYR190B, TYR226B, TYR52S, TYR61S, TYR62S, TYR66S, TYR94S, VAL110S, VAL189B, VAL262B, VAL51S
• S-C: ALA97S, ARG53C, ASN57C, ASN57S, ASN8C, ASN96S, ASP47S, CYS90S, GLN2C, GLU45S, GLU54S, GLU86S, GLU89S, GLU93S, HIS55S, HIS56S, ILE6C, LEU42S, LEU72S, LEU7C, LEU9C, LYS71S, LYS92S, MET1C, MET69S, MET74S, PHE44S, PRO5C, PRO73S, PRO95S, THR46S, THR68S, TRP4C, TRP67S, TRP70S, TYR52C, TYR94S, VAL3C
• S-I: ALA97I, ARG53S, ASN57I, ASN57S, ASN8S, ASN96I, ASP47I, CYS90I, GLN2S, GLU45I, GLU54I, GLU86I, GLU89I, GLU93I, HIS55I, HIS56I, ILE6S, LEU42I, LEU72I, LEU7S, LEU9S, LYS71I, LYS92I, MET1S, MET69I, PHE44I, PRO5S, PRO73I, PRO95I, THR46I, THR68I, TRP4S, TRP67I, TRP70I, TYR52S, TYR94I, VAL3S
• B-C: ALA228B, ALA230B, ALA254B, ALA257B, ALA27C, ALA414B, ALA417B, ALA419B, ALA423B, ALA426B, ALA430B, ALA448B, ALA457B, ARG100C, ARG108C, ARG159B, ARG167B, ARG194B, ARG258B, ARG28C, ARG350B, ARG421B, ARG431B, ARG435B, ARG53C, ARG65C, ASN163B, ASN287B, ASN35C, ASN36C, ASN413B, ASN432B, ASN57C, ASN8C, ASP160B, ASP198B, ASP24C, ASP31C, ASP351B, ASP396B, ASP397B, ASP63C, CYS112C, CYS192B, CYS284B, CYS427B, GLN111C, GLN156B, GLN229B, GLN25C, GLN29C, GLN2C, GLN429B, GLU109C, GLU13C, GLU158B, GLU191B, GLU231B, GLU234B, GLU259B, GLU425B, GLU433B, GLU43C, GLU454B, GLY103C, GLY166B, GLY195B, GLY196B, GLY233B, GLY237B, GLY261B, GLY288B, GLY373B, GLY412B, GLY416B, GLY434B, GLY49C, GLY60C, GLY64C, HIS153B, HIS409B, HIS56C, ILE101C, ILE102C, ILE113C, ILE155B, ILE235B, ILE264B, ILE6C, LEU15C, LEU162B, LEU169B, LEU18C, LEU193B, LEU197B, LEU21C, LEU225B, LEU260B, LEU26C, LEU289B, LEU290B, LEU33C, LEU375B, LEU424B, LEU455B, LEU7C, LEU9C, LYS10C, LYS11C, LYS161B, LYS164B, LYS227B, LYS236B, MET1C, PHE115C, PHE199B, PHE256B, PHE50C, PRO168B, PRO19C, PRO20C, PRO263B, PRO410B, PRO415B, PRO453B, PRO59C, PRO5C, SER114C, SER16C, SER452B, SER58C, THR14C, THR22C, THR232B, TRP38C, TRP411B, TRP451B, TRP4C, TRP67C, TYR12C, TYR165B, TYR17C, TYR190B, TYR226B, TYR283B, TYR32C, TYR52C, TYR61C, TYR62C, TYR66C, VAL110C, VAL157B, VAL255B, VAL262B, VAL265B, VAL30C, VAL3C, VAL418B, VAL422B, VAL428B, VAL51C
• B-E: ALA182E, ARG159B, ARG187E, ARG213E, ARG215E, ARG217E, ARG258B, ARG285B, ASN163B, ASN184E, ASN287B, ASP160B, ASP216E, ASP286B, CYS284B, GLN149B, GLN156B, GLN209E, GLU158B, GLU223E, GLU259E, GLY150B, GLY288B, HIS153B, HIS282B, LEU162B, LEU180E, LEU219E, LEU260E, LEU289B, LYS146B, LYS161B, LYS164B, LYS183E, LYS252E, MET212E, PHE148B, PHE211E, PHE220E, PHE256E, PRO151B, PRO152B, PRO210E, PRO372B, SER181E, SER208E, SER370B, THR371B, TRP214E, TRP368B, TYR165B, TYR185E, TYR283B, VAL157B, VAL255E, VAL369B
• C-E: ALA182E, ALA188E, ALA222E, ALA224E, ALA228E, ALA230E, ALA257E, ALA414E, ARG100C, ARG108C, ARG187E, ARG194E, ARG215E, ARG217E, ARG258E, ARG53C, ARG65C, ASN107C, ASN184E, ASN413E, ASN57C, ASP105C, ASP216E, ASP47C, ASP63C, CYS112C, CYS221E, CYS41C, GLN111C, GLN229E, GLU109C, GLU191E, GLU223E, GLU231E, GLU259E, GLU43C, GLU45C, GLU54C, GLY103C, GLY179E, GLY186E, GLY261E, GLY408E, GLY412E, GLY416E, GLY60C, GLY64C, HIS409E, HIS48C, HIS55C, HIS56C, ILE102C, ILE113C, LEU178E, LEU180E, LEU219E, LEU225E, LEU260E, LEU407E, LEU42C, LEU72C, LYS183E, LYS227E, LYS71C, MET69C, PHE104C, PHE211E, PHE218E, PHE220E, PHE256E, PHE44C, PRO410E, PRO415E, PRO59C, PRO73C, SER106C, SER114C, SER181E, SER58C, THR46C, THR68C, TRP411E, TRP67C, TRP70C, TYR185E, TYR190E, TYR226E, TYR52C, TYR61C, TYR62C, TYR66C, TYR94C, VAL110C, VAL189E, VAL262E, VAL51C
• C-F: ALA97C, ARG53F, ASN57C, ASN57F, ASN8F, ASN96C, ASP47C, CYS90C, GLN2F, GLU45C, GLU54C, GLU86C, GLU89C, GLU93C, HIS55C, HIS56C, ILE6F, LEU72C, LEU7F, LEU9F, LYS71C, LYS92C, MET1F, MET69C, MET74C, PHE44C, PRO5F, PRO73C, PRO95C, THR46C, THR68C, TRP4F, TRP67C, TRP70C, TYR52F, TYR94C, VAL3F
• E-F: ALA228E, ALA230E, ALA254E, ALA257E, ALA27F, ALA414E, ALA417E, ALA419E, ALA423E, ALA426E, ALA430E, ALA448E, ALA457E, ARG100F, ARG108F, ARG159E, ARG167E, ARG194E, ARG258E, ARG28F, ARG350E, ARG421E, ARG431E, ARG435E, ARG53F, ARG65F, ASN163E, ASN287E, ASN35F, ASN36F, ASN413E, ASN432E, ASN57F, ASN8F, ASP160E, ASP198E, ASP24F, ASP31F, ASP351E, ASP396E, ASP397E, ASP63F, CYS112F, CYS192E, CYS284E, CYS427E, GLN111F, GLN156E, GLN229E, GLN25F, GLN29F, GLN2F, GLN429E, GLU109F, GLU13F, GLU158E, GLU191E, GLU231E, GLU234E, GLU259E, GLU425E, GLU433E, GLU43F, GLU454E, GLY103F, GLY166E, GLY195E, GLY196E, GLY233E, GLY237E, GLY261E, GLY288E, GLY373E, GLY412E, GLY416E, GLY434E, GLY49F, GLY60F, GLY64F, HIS153E, HIS409E, HIS56F, ILE101F, ILE102F, ILE113F, ILE155E, ILE235E, ILE264E, ILE6F, LEU15F, LEU162E, LEU169E, LEU18F, LEU193E, LEU197E, LEU21F, LEU225E, LEU260E, LEU26F, LEU289E, LEU290E, LEU33F, LEU375E, LEU424E, LEU455E, LEU7F, LEU9F, LYS10F, LYS11F, LYS161E, LYS164E, LYS227E, LYS236E, MET1F, PHE115F, PHE199E, PHE256E, PHE50F, PRO168E, PRO19F, PRO20F, PRO263E, PRO410E, PRO415E, PRO453E, PRO59F, PRO5F, SER114F, SER16F, SER452E, SER58F, THR14F, THR22F, THR232E, TRP38F, TRP411E, TRP451E, TRP4F, TRP67F, TYR12F, TYR165E, TYR17F, TYR190E, TYR226E, TYR283E, TYR32F, TYR52F, TYR61F, TYR62F, TYR66F, VAL110F, VAL157E, VAL255E, VAL262E, VAL265E, VAL30F, VAL3F, VAL418E, VAL422E, VAL428E, VAL51F
• E-H: ALA182H, ARG159E, ARG187H, ARG213H, ARG215H, ARG217H, ARG258E, ARG285E, ASN163E, ASN184H, ASN287E, ASP160E, ASP216H, ASP286E, CYS284E, GLN149E, GLN156E, GLN209H, GLU158E, GLU223H, GLU259H, GLY150E, GLY288E, HIS153E, HIS282E, LEU162E, LEU180H, LEU219H, LEU260H, LEU289E, LYS146E, LYS161E, LYS164E, LYS183H, LYS252H, MET212H, PHE148E, PHE211H, PHE220H, PHE256H, PRO151E, PRO152E, PRO210H, PRO372E, SER181H, SER208H, SER370E, THR371E, TRP214H, TRP368E, TYR165E, TYR185H, TYR283E, VAL157E, VAL255H, VAL369E
• F-H: ALA182H, ALA188H, ALA222H, ALA224H, ALA228H, ALA230H, ALA257H, ALA414H, ARG100F, ARG108F, ARG187H, ARG194H, ARG215H, ARG217H, ARG258H, ARG53F, ARG65F, ASN107F, ASN184H, ASN413H, ASN57F, ASP105F, ASP216H, ASP47F, ASP63F, CYS112F, CYS221H, CYS41F, GLN111F, GLN229H, GLU109F, GLU191H, GLU223H, GLU231H, GLU259H, GLU43F, GLU45F, GLU54F, GLY103F, GLY179H, GLY186H, GLY261H, GLY408H, GLY412H, GLY416H, GLY60F, GLY64F, HIS409H, HIS48F, HIS55F, HIS56F, ILE102F, ILE113F, LEU178H, LEU180H, LEU219H, LEU225H, LEU260H, LEU407H, LEU42F, LEU72F, LYS183H, LYS227H, LYS71F, MET69F, PHE104F, PHE211H, PHE218H, PHE220H, PHE256H, PHE44F, PRO410H, PRO415H, PRO59F, PRO73F, SER106F, SER114F, SER181H, SER58F, THR46F, THR68F, TRP411H, TRP67F, TRP70F, TYR185H, TYR190H, TYR226H, TYR52F, TYR61F, TYR62F, TYR66F, TYR94F, VAL110F, VAL189H, VAL262H, VAL51F
• F-I: ALA97F, ARG53I, ASN57F, ASN57I, ASN8I, ASN96F, ASP47F, CYS90F, GLN2I, GLU45F, GLU54F, GLU86F, GLU89F, GLU93F, HIS55F, HIS56F, ILE6I, LEU42F, LEU72F, LEU7I, LEU9I, LYS71F, LYS92F, MET1I, MET69F, MET74F, PHE44F, PRO5I, PRO73F, PRO95F, THR46F, THR68F, TRP4I, TRP67F, TRP70F, TYR52I, TYR94F, VAL3I
• H-I: ALA228H, ALA230H, ALA254H, ALA257H, ALA27I, ALA414H, ALA417H, ALA419H, ALA423H, ALA426H, ALA430H, ALA448H, ALA457H, ARG100I, ARG108I, ARG159H, ARG167H, ARG194H, ARG258H, ARG28I, ARG350H, ARG421H, ARG431H, ARG435H, ARG53I, ARG65I, ASN163H, ASN287H, ASN35I, ASN36I, ASN413H, ASN432H, ASN57I, ASN8I, ASP160H, ASP198H, ASP24I, ASP31I, ASP351H, ASP396H, ASP397H, ASP63I, CYS112I, CYS192H, CYS284H, CYS427H, GLN111I, GLN156H, GLN229H, GLN25I, GLN29I, GLN2I, GLN429H, GLU109I, GLU13I, GLU158H, GLU191H, GLU231H, GLU234H, GLU259H, GLU425H, GLU433H, GLU43I, GLU454H, GLY103I, GLY166H, GLY195H, GLY196H, GLY233H, GLY237H, GLY261H, GLY288H, GLY373H, GLY412H, GLY416H, GLY434H, GLY49I, GLY60I, GLY64I, HIS153H, HIS409H, HIS56I, ILE101I, ILE102I, ILE113I, ILE155H, ILE235H, ILE264H, ILE6I, LEU15I, LEU162H, LEU169H, LEU18I, LEU193H, LEU197H, LEU21I, LEU225H, LEU260H, LEU26I, LEU289H, LEU290H, LEU33I, LEU375H, LEU424H, LEU455H, LEU7I, LEU9I, LYS10I, LYS11I, LYS161H, LYS164H, LYS227H, LYS236H, MET1I, PHE115I, PHE199H, PHE256H, PHE50I, PRO168H, PRO19I, PRO20I, PRO263H, PRO410H, PRO415H, PRO453H, PRO59I, PRO5I, SER114I, SER16I, SER452H, SER58I, THR14I, THR22I, THR232H, TRP38I, TRP411H, TRP451H, TRP4I, TRP67I, TYR12I, TYR165H, TYR17I, TYR190H, TYR226H, TYR283H, TYR32I, TYR52I, TYR61I, TYR62I, TYR66I, VAL110I, VAL157H, VAL255H, VAL262H, VAL265H, VAL30I, VAL3I, VAL418H, VAL422H, VAL428H, VAL51I