1RWT

crystal structure of spinach major light-harvesting complex at 2.72 angstrom resolution

• Total interactions analyzed: 45
• Total true interactions: 16
• Strongest Interaction:
  • Chains: I-J
  • Int. Res.: 95
  • Norm. En. per Res.: -1.7747
• Hub Node: B(4)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-J	0.0	0.0	-1.0362	-1.0362	10	0	0	155	0	1	2
B-C	0.0	0.0	-1.2769	-1.2769	10	0	0	180	0	2	2
B-F	-6.7207	15.343	-161.26	-152.6377	90	4	7	7093	0	9	13
B-G	0.0	12.1119	-156.401	-144.2891	89	0	6	6692	0	7	11
B-H	0.0	0.0	-0.0016	-0.0016	2	0	0	4	0	0	0
C-E	-4.9079	9.9894	-158.792	-153.7105	92	1	5	6806	0	7	11
C-H	-5.7722	8.4612	-164.402	-161.7129	93	0	6	7000	0	7	11
D-F	0.0	0.0	-1.2238	-1.2238	10	0	0	174	0	1	2
D-G	0.0	0.0	-0.0018	-0.0018	2	0	0	4	0	0	0
D-I	0.0	9.4327	-161.241	-151.8083	93	1	6	7045	0	7	11
D-J	0.0	8.6728	-151.834	-143.1612	87	1	5	6629	0	7	11
E-H	0.0	12.1762	-153.684	-141.5078	91	2	5	6816	0	7	11
F-G	-9.9065	7.0679	-160.606	-163.4446	94	1	5	6959	0	6	11
G-H	0.0	0.0	-1.1287	-1.1287	10	0	0	161	0	1	2
G-J	0.0	0.0	-1.0741	-1.0741	10	0	0	157	0	2	2
I-J	-10.4066	7.5796	-165.766	-168.593	95	0	5	7003	0	6	11

Interface residues

• A-J: ALA214J, ASP215J, GLN122A, GLU107A, GLY108A, HIS120A, LEU213J, PRO216J, SER123A, VAL217J
• B-C: ALA214B, ASP215B, GLN122C, GLU107C, GLY108C, HIS120C, LEU213B, PRO216B, SER123C, VAL217B
• B-F: ALA129B, ALA137B, ALA144B, ALA198B, ALA221F, ALA225F, ALA49F, ALA53F, ALA59B, ARG142B, ASN218F, ASN220F, ASN223F, ASN61B, ASP47F, ASP54B, ASP54F, GLN103B, GLN197B, GLU139B, GLU31F, GLU56B, GLU63B, GLU94B, GLY101B, GLY136B, GLY140B, GLY145B, GLY146B, GLY202B, GLY231F, GLY26F, GLY30F, GLY50F, HIS212F, ILE104B, ILE124B, ILE127B, ILE143B, ILE199B, LEU125B, LEU25F, LEU51B, LEU51F, LEU64B, LYS203B, LYS232F, LYS60B, LYS99B, PHE105B, PHE194B, PHE195B, PHE224F, PHE228B, PHE228F, PHE28F, PHE58B, PHE98B, PRO147B, PRO154B, PRO216F, PRO230F, PRO27F, PRO33F, PRO55B, PRO55F, SER102B, SER123B, SER29F, SER32F, SER34F, SER52F, THR201B, THR226F, THR48F, THR57B, THR57F, TRP128B, TRP222F, TRP97B, TYR141B, TYR24F, TYR35F, VAL138B, VAL151B, VAL196B, VAL200B, VAL217F, VAL229F, VAL96B
• B-G: ALA129G, ALA137G, ALA144G, ALA198G, ALA221B, ALA225B, ALA49B, ALA53B, ALA59G, ARG142G, ASN218B, ASN220B, ASN223B, ASN61G, ASP47B, ASP54B, ASP54G, GLN103G, GLN131G, GLN197G, GLU139G, GLU31B, GLU56G, GLU63G, GLU94G, GLY101G, GLY136G, GLY140G, GLY145G, GLY146G, GLY202G, GLY231B, GLY26B, GLY30B, GLY50B, HIS212B, ILE104G, ILE124G, ILE127G, ILE143G, ILE199G, LEU125G, LEU25B, LEU51B, LEU51G, LEU64G, LYS203G, LYS60G, LYS99G, PHE105G, PHE194G, PHE195G, PHE224B, PHE228B, PHE28B, PHE58G, PHE98G, PRO147G, PRO154G, PRO216B, PRO230B, PRO27B, PRO33B, PRO55B, PRO55G, SER102G, SER123G, SER29B, SER32B, SER34B, SER52B, THR201G, THR226B, THR48B, THR57G, TRP128G, TRP222B, TRP46B, TRP97G, TYR141G, TYR24B, TYR35B, VAL138G, VAL151G, VAL196G, VAL200G, VAL217B, VAL229B, VAL96G
• B-H: VAL217B, VAL217H
• C-E: ALA129E, ALA137E, ALA144E, ALA198E, ALA221C, ALA225C, ALA49C, ALA53C, ALA59E, ARG142E, ASN218C, ASN219C, ASN220C, ASN223C, ASN61E, ASP47C, ASP54C, ASP54E, GLN103E, GLN131E, GLN197E, GLU139E, GLU31C, GLU56E, GLU63E, GLU94E, GLY101E, GLY136E, GLY140E, GLY145E, GLY146E, GLY202E, GLY231C, GLY26C, GLY30C, GLY50C, HIS212C, ILE104E, ILE124E, ILE127E, ILE133E, ILE143E, ILE199E, LEU125E, LEU25C, LEU51C, LEU51E, LEU64E, LYS203E, LYS60E, LYS99E, PHE105E, PHE194E, PHE195E, PHE224C, PHE228C, PHE228E, PHE28C, PHE58E, PHE98E, PRO147E, PRO216C, PRO230C, PRO27C, PRO33C, PRO55C, PRO55E, SER102E, SER123E, SER29C, SER32C, SER34C, SER52C, THR201E, THR226C, THR48C, THR57C, THR57E, TRP128E, TRP222C, TRP46C, TRP97E, TYR141E, TYR24C, TYR35C, VAL138E, VAL151E, VAL196E, VAL200E, VAL217C, VAL229C, VAL96E
• C-H: ALA129C, ALA137C, ALA144C, ALA198C, ALA221H, ALA225H, ALA49H, ALA53H, ALA59C, ARG142C, ASN218H, ASN220H, ASN223H, ASN227H, ASN61C, ASP47H, ASP54C, ASP54H, GLN103C, GLN131C, GLN197C, GLU139C, GLU31H, GLU56C, GLU63C, GLU94C, GLY101C, GLY136C, GLY140C, GLY145C, GLY146C, GLY202C, GLY231H, GLY26H, GLY30H, GLY45H, GLY50H, HIS212H, ILE104C, ILE124C, ILE127C, ILE143C, ILE199C, LEU125C, LEU25H, LEU36H, LEU51C, LEU51H, LEU64C, LYS203C, LYS60C, LYS99C, PHE105C, PHE195C, PHE224H, PHE228C, PHE228H, PHE28H, PHE58C, PHE98C, PRO147C, PRO154C, PRO216H, PRO230H, PRO27H, PRO33H, PRO55C, PRO55H, SER102C, SER123C, SER29H, SER32H, SER34H, SER52H, THR201C, THR226H, THR48H, THR57C, THR57H, TRP128C, TRP222H, TRP46H, TRP97C, TYR141C, TYR24H, TYR35H, VAL138C, VAL151C, VAL196C, VAL200C, VAL217H, VAL229H, VAL96C
• D-F: ALA214D, ASP215D, GLN122F, GLU107F, GLY108F, HIS120F, LEU213D, PRO216D, SER123F, VAL217D
• D-G: VAL217D, VAL217G
• D-I: ALA129D, ALA137D, ALA144D, ALA198D, ALA221I, ALA225I, ALA49I, ALA53I, ALA59D, ARG142D, ASN218I, ASN220I, ASN223I, ASN227I, ASN61D, ASP47I, ASP54D, ASP54I, GLN103D, GLN131D, GLN197D, GLU139D, GLU31I, GLU56D, GLU63D, GLU94D, GLY101D, GLY136D, GLY140D, GLY145D, GLY146D, GLY202D, GLY231I, GLY26I, GLY30I, GLY45I, GLY50I, HIS212I, ILE104D, ILE124D, ILE127D, ILE143D, ILE199D, LEU125D, LEU25I, LEU36I, LEU51D, LEU51I, LEU64D, LYS203D, LYS60D, LYS99D, PHE105D, PHE194D, PHE195D, PHE224I, PHE228D, PHE228I, PHE28I, PHE58D, PHE98D, PRO147D, PRO216I, PRO230I, PRO27I, PRO33I, PRO55D, PRO55I, SER102D, SER123D, SER29I, SER32I, SER34I, SER52I, THR201D, THR226I, THR48I, THR57D, THR57I, TRP128D, TRP222I, TRP46I, TRP97D, TYR141D, TYR24I, TYR35I, VAL138D, VAL151D, VAL196D, VAL200D, VAL217I, VAL229I, VAL96D
• D-J: ALA129J, ALA137J, ALA144J, ALA198J, ALA221D, ALA225D, ALA49D, ALA53D, ALA59J, ARG142J, ASN218D, ASN220D, ASN223D, ASN61J, ASP47D, ASP54D, ASP54J, GLN103J, GLN197J, GLU139J, GLU31D, GLU56J, GLU63J, GLU94J, GLY101J, GLY136J, GLY140J, GLY145J, GLY146J, GLY202J, GLY231D, GLY26D, GLY30D, GLY50D, HIS212D, ILE104J, ILE124J, ILE127J, ILE143J, ILE199J, LEU125J, LEU25D, LEU51D, LEU51J, LEU64J, LYS203J, LYS60J, LYS99J, PHE105J, PHE194J, PHE195J, PHE224D, PHE228D, PHE28D, PHE58J, PHE98J, PRO147J, PRO216D, PRO230D, PRO27D, PRO33D, PRO55D, PRO55J, SER102J, SER123J, SER29D, SER32D, SER34D, SER52D, THR201J, THR226D, THR48D, THR57D, THR57J, TRP128J, TRP222D, TRP97J, TYR141J, TYR24D, TYR35D, VAL138J, VAL151J, VAL196J, VAL200J, VAL217D, VAL229D, VAL96J
• E-H: ALA129H, ALA137H, ALA144H, ALA198H, ALA221E, ALA225E, ALA49E, ALA53E, ALA59H, ARG142H, ASN218E, ASN219E, ASN220E, ASN223E, ASN61H, ASP47E, ASP54E, ASP54H, GLN103H, GLN131H, GLN197H, GLU139H, GLU31E, GLU56H, GLU63H, GLY101H, GLY136H, GLY140H, GLY145H, GLY146H, GLY202H, GLY231E, GLY26E, GLY30E, GLY50E, HIS212E, ILE104H, ILE124H, ILE127H, ILE143H, ILE199H, LEU125H, LEU25E, LEU51E, LEU51H, LEU64H, LYS203H, LYS60H, LYS99H, PHE105H, PHE194H, PHE195H, PHE224E, PHE228E, PHE228H, PHE28E, PHE58H, PHE98H, PRO147H, PRO154H, PRO216E, PRO230E, PRO27E, PRO33E, PRO55E, PRO55H, SER102H, SER123H, SER29E, SER32E, SER34E, SER52E, THR201H, THR226E, THR48E, THR57H, TRP128H, TRP222E, TRP46E, TRP97H, TYR141H, TYR24E, TYR35E, VAL132H, VAL138H, VAL151H, VAL196H, VAL200H, VAL217E, VAL229E, VAL96H
• F-G: ALA129F, ALA137F, ALA144F, ALA198F, ALA221G, ALA225G, ALA49G, ALA53G, ALA59F, ARG142F, ASN218G, ASN219G, ASN220G, ASN223G, ASN61F, ASP47G, ASP54F, ASP54G, GLN103F, GLN131F, GLN197F, GLU139F, GLU31G, GLU56F, GLU63F, GLU94F, GLY101F, GLY136F, GLY140F, GLY145F, GLY146F, GLY202F, GLY231G, GLY26G, GLY30G, GLY45G, GLY50G, HIS212G, ILE104F, ILE124F, ILE127F, ILE143F, ILE199F, LEU125F, LEU25G, LEU36G, LEU51F, LEU51G, LEU64F, LYS203F, LYS60F, LYS99F, PHE105F, PHE194F, PHE195F, PHE224G, PHE228F, PHE228G, PHE28G, PHE58F, PHE98F, PRO147F, PRO154F, PRO216G, PRO230G, PRO27G, PRO33G, PRO55F, PRO55G, SER102F, SER123F, SER29G, SER32G, SER34G, SER52G, THR201F, THR226G, THR48G, THR57F, THR57G, TRP128F, TRP222G, TRP46G, TRP97F, TYR141F, TYR24G, TYR35G, VAL138F, VAL151F, VAL196F, VAL200F, VAL217G, VAL229G, VAL96F
• G-H: ALA214H, ASP215H, GLN122G, GLU107G, GLY108G, HIS120G, LEU213H, PRO216H, SER123G, VAL217H
• G-J: ALA214G, ASP215G, GLN122J, GLU107J, GLY108J, HIS120J, LEU213G, PRO216G, SER123J, VAL217G
• I-J: ALA129I, ALA137I, ALA144I, ALA198I, ALA221J, ALA225J, ALA49J, ALA53J, ALA59I, ARG142I, ASN218J, ASN219J, ASN220J, ASN223J, ASN227J, ASN61I, ASP47J, ASP54I, ASP54J, GLN103I, GLN131I, GLN197I, GLU139I, GLU31J, GLU56I, GLU63I, GLU94I, GLY101I, GLY136I, GLY140I, GLY145I, GLY146I, GLY202I, GLY231J, GLY26J, GLY30J, GLY45J, GLY50J, HIS212J, ILE104I, ILE124I, ILE127I, ILE143I, ILE199I, LEU125I, LEU25J, LEU36J, LEU51I, LEU51J, LEU64I, LYS203I, LYS60I, LYS99I, PHE105I, PHE194I, PHE195I, PHE224J, PHE228I, PHE228J, PHE28J, PHE58I, PHE98I, PRO147I, PRO154I, PRO216J, PRO230J, PRO27J, PRO33J, PRO55I, PRO55J, SER102I, SER123I, SER29J, SER32J, SER34J, SER52J, THR201I, THR226J, THR48J, THR57I, THR57J, TRP128I, TRP222J, TRP46J, TRP97I, TYR141I, TYR24J, TYR35J, VAL138I, VAL151I, VAL196I, VAL200I, VAL217J, VAL229J, VAL96I