1RK8

structure of the cytosolic protein pym bound to the mago- y14 core of the exon junction complex

• Total interactions analyzed: 3
• Total true interactions: 3
• Strongest Interaction:
  • Chains: B-C
  • Int. Res.: 49
  • Norm. En. per Res.: -5.4489
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-56.9579	-17.2878	-334.427	-408.6727	100	16	8	12115	2	27	31
A-C	-24.4465	22.5725	-98.0986	-99.9727	31	4	0	3498	0	17	19
B-C	-47.1295	-120.8008	-99.0665	-266.9968	49	6	0	3573	8	30	15

Interface residues

• A-B: ALA117A, ALA51B, ARG108A, ARG109A, ARG121B, ARG63B, ARG68A, ASN101A, ASN105A, ASP107A, ASP129B, ASP147A, ASP30B, ASP67B, CYS122B, CYS132B, CYS149A, GLN128B, GLN142A, GLN145A, GLN55B, GLN67A, GLU118B, GLU120A, GLU122A, GLU50B, GLU59B, GLU60B, GLU69B, GLU82A, GLY106B, GLY111A, GLY115A, GLY139B, GLY153A, GLY31B, GLY72A, HIS103A, HIS141B, HIS54B, ILE102A, ILE138B, ILE144B, ILE64B, ILE65B, ILE70B, ILE74A, ILE80A, LEU104A, LEU106A, LEU108B, LEU118A, LEU126B, LEU130B, LEU133B, LEU137B, LEU140B, LEU33B, LEU61B, LEU75A, LYS100A, LYS114A, LYS131A, LYS131B, LYS143B, LYS152A, LYS32B, LYS49B, MET58B, PHE123B, PHE135B, PHE142B, PHE150A, PHE27B, PHE52B, PHE76A, PRO66A, SER107B, SER113A, SER136B, SER56B, SER68B, SER69A, SER79A, THR110A, THR78A, TRP148A, TRP73A, TYR116A, TYR124B, TYR125B, VAL119A, VAL127B, VAL134B, VAL146A, VAL151A, VAL53B, VAL57B, VAL70A, VAL77A
• A-C: ALA84A, ARG108A, ARG109A, ARG24C, ARG27C, ARG28C, ASP107A, ASP31C, GLN85A, GLU82A, GLU83A, GLY10C, GLY111A, GLY32C, HIS81A, ILE13C, LEU106A, LYS114A, LYS11C, LYS25C, LYS30C, MET140A, PHE112A, PHE12C, PRO35C, SER113A, THR110A, TYR33C, TYR4C, VAL29C, VAL34C
• B-C: ALA15C, ALA26C, ARG121B, ARG18C, ARG24C, ARG27C, ARG63B, ASP116B, ASP129B, ASP20C, ASP67B, ASP74B, ASP75B, CYS122B, GLN128B, GLN72B, GLU118B, GLU69B, GLU73B, GLY119B, ILE13C, ILE64B, ILE65B, ILE66B, ILE70B, LEU108B, LEU120B, LEU126B, LEU76B, LYS115B, LYS17C, LYS25C, MET71B, PHE123B, PRO117B, PRO14C, PRO19C, PRO35C, PRO77B, SER68B, THR16C, THR22C, THR3C, TRP23C, TRP78B, TYR124B, TYR125B, TYR33C, TYR4C