1RC5

crystal structure of mg(ii)-complex of rnase iii endonuclease domain from aquifex aeolicus at 2.30 angstrom resolution

• Total interactions analyzed: 6
• Total true interactions: 5
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 108
  • Norm. En. per Res.: -4.0716
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-112.2151	-1.0519	-326.462	-439.729	108	25	17	12886	2	42	47
A-D	0.0	-19.3865	-34.1776	-53.5641	35	2	1	1931	1	23	13
B-C	0.0	-32.1876	-6.2612	-38.4488	21	0	0	649	1	13	7
B-D	-5.8467	-32.9033	-8.8652	-47.6153	18	1	0	611	3	14	8
C-D	-91.2377	-4.8859	-324.944	-421.0676	108	31	18	12817	2	43	45

Interface residues

• A-B: ALA114A, ALA124A, ALA245B, ALA272B, ALA314B, ALA324B, ALA45A, ALA72A, ARG122A, ARG128A, ARG263B, ARG322B, ARG328B, ARG63A, ASN125A, ASN248B, ASN261B, ASN325B, ASN48A, ASN61A, ASP123A, ASP244B, ASP253B, ASP323B, ASP44A, ASP53A, GLN257B, GLN57A, GLU129A, GLU237B, GLU240B, GLU264B, GLU329B, GLU37A, GLU40A, GLU64A, GLY121A, GLY243B, GLY265B, GLY321B, GLY43A, GLY65A, HIS235B, HIS35A, ILE118A, ILE251B, ILE275B, ILE318B, ILE51A, ILE75A, LEU239B, LEU242B, LEU246B, LEU254B, LEU255B, LEU267B, LEU270B, LEU274B, LEU39A, LEU42A, LEU46A, LEU54A, LEU55A, LEU67A, LEU70A, LEU74A, LYS223B, LYS23A, LYS262B, LYS271B, LYS32A, LYS33A, LYS62A, LYS71A, PHE126A, PHE241B, PHE249B, PHE250B, PHE266B, PHE326B, PHE41A, PHE49A, PHE50A, PHE66A, PRO269B, PRO69A, SER120A, SER259B, SER268B, SER59A, SER68A, THR127A, THR238B, THR327B, THR38A, TYR117A, TYR132A, TYR258B, TYR317B, TYR332B, TYR58A, VAL247B, VAL252B, VAL256B, VAL28A, VAL47A, VAL52A, VAL56A
• A-D: ALA72A, ARG147A, ARG694D, ARG697D, ASN48A, ASP44A, GLU102A, GLU622D, GLU634D, GLU64A, GLU77A, GLU78A, GLY65A, ILE695D, ILE75A, LEU67A, LEU70A, LYS632D, LYS633D, LYS696D, LYS71A, MET603D, PHE66A, PHE79A, PHE80A, PRO69A, SER619D, SER629D, SER631D, SER68A, SER76A, THR103A, THR626D, TYR630D, TYR73A
• B-C: ARG463C, ARG547C, ASN281B, ASN301B, ASN461C, GLN457C, GLU277B, GLU278B, GLU302B, HIS348B, HIS548C, LYS299B, LYS462C, LYS544C, PHE279B, PRO460C, SER276B, SER459C, THR303B, TYR273B, TYR458C
• B-D: ALA272B, ASN248B, ASP244B, ASP307B, GLU237B, GLU240B, GLU310B, GLU634D, ILE275B, ILE304B, LYS271B, LYS623D, LYS632D, LYS633D, PHE241B, SER631D, THR303B, TYR236B
• C-D: ALA445C, ALA472C, ALA514C, ALA524C, ALA645D, ALA672D, ALA714D, ALA724D, ARG463C, ARG522C, ARG528C, ARG663D, ARG722D, ARG728D, ASN448C, ASN461C, ASN525C, ASN648D, ASN661D, ASN725D, ASP444C, ASP453C, ASP507C, ASP523C, ASP644D, ASP653D, ASP723D, GLN457C, GLN657D, GLU437C, GLU440C, GLU464C, GLU529C, GLU637D, GLU640D, GLU664D, GLU729D, GLY443C, GLY465C, GLY521C, GLY643D, GLY665D, GLY721D, HIS435C, HIS635D, ILE451C, ILE475C, ILE518C, ILE651D, ILE718D, LEU439C, LEU442C, LEU446C, LEU454C, LEU455C, LEU467C, LEU470C, LEU474C, LEU639D, LEU642D, LEU646D, LEU654D, LEU655D, LEU667D, LEU670D, LEU674D, LYS432C, LYS433C, LYS462C, LYS471C, LYS623D, LYS662D, LYS671D, PHE441C, PHE449C, PHE450C, PHE466C, PHE526C, PHE641D, PHE649D, PHE650D, PHE666D, PHE726D, PRO469C, PRO669D, SER459C, SER468C, SER520C, SER659D, SER668D, SER720D, THR438C, THR527C, THR638D, THR727D, TYR458C, TYR517C, TYR532C, TYR658D, TYR717D, TYR732D, VAL428C, VAL447C, VAL452C, VAL456C, VAL647D, VAL652D, VAL656D