1QSC

crystal structure of the traf domain of traf2 in a complex with a peptide from the cd40 receptor

• Total interactions analyzed: 15
• Total true interactions: 6
• Strongest Interaction:
  • Chains: C-F
  • Int. Res.: 46
  • Norm. En. per Res.: -5.1036
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-25.3615	-20.4545	-139.319	-185.135	83	12	6	6049	2	25	25
A-C	-21.7968	-8.5603	-125.325	-155.682	82	11	7	6010	0	24	24
A-D	-63.1047	-19.4789	-154.857	-237.4406	47	14	1	5076	2	3	2
B-C	-15.1291	-8.5948	-131.46	-155.1838	87	10	8	6302	1	27	25
B-E	-56.277	-22.261	-141.362	-219.9	44	14	1	4877	2	3	2
C-F	-55.7529	-20.9581	-158.055	-234.766	46	11	1	5032	2	3	3

Interface residues

• A-B: ALA334A, ALA334B, ALA336B, ALA347B, ALA380B, ALA420A, ALA489B, ALA494B, ARG385A, ARG423A, ARG458A, ARG486B, ASN418A, ASN438B, ASN439B, ASP332B, ASP337A, ASP337B, ASP351B, ASP419A, ASP436B, ASP487B, GLN323A, GLN340A, GLN340B, GLN437B, GLU325B, GLU339A, GLU339B, GLU344A, GLU344B, GLU346A, GLU346B, GLY329A, GLY329B, GLY352B, GLY387A, GLY416A, HIS442B, ILE328A, ILE328B, ILE355B, ILE490B, ILE492B, LEU324A, LEU324B, LEU330A, LEU333A, LEU333B, LEU338A, LEU338B, LEU343A, LEU343B, LEU421A, LEU422A, LEU435B, LYS331A, LYS331B, LYS341A, LYS341B, LYS357B, LYS415A, LYS493B, PHE354B, PHE381B, PHE491B, PRO379B, PRO417A, SER327A, SER348A, SER348B, SER359B, SER384A, THR349B, TRP356B, TYR350A, TYR350B, TYR382A, TYR386A, TYR484B, VAL342A, VAL342B, VAL353B
• A-C: ALA334A, ALA334C, ALA336A, ALA347A, ALA380A, ALA420C, ALA489A, ALA494A, ARG326C, ARG385C, ARG423C, ARG458C, ARG486A, ASN418C, ASN438A, ASN439A, ASP332A, ASP337A, ASP337C, ASP351A, ASP419C, ASP436A, ASP487A, GLN323C, GLN340A, GLN340C, GLN437A, GLU325A, GLU325C, GLU339A, GLU339C, GLU344A, GLU344C, GLU346A, GLY329C, GLY387C, GLY416C, HIS442A, ILE328A, ILE328C, ILE355A, ILE490A, ILE492A, LEU324A, LEU324C, LEU330A, LEU330C, LEU338A, LEU338C, LEU343A, LEU343C, LEU421C, LEU422C, LEU435A, LYS331A, LYS331C, LYS341A, LYS341C, LYS357A, LYS415C, LYS493A, PHE354A, PHE381A, PHE491A, PRO379A, PRO417C, SER327A, SER327C, SER348A, SER348C, SER359A, SER384C, THR349A, TRP356A, TYR350A, TYR350C, TYR382C, TYR386C, TYR484A, VAL342A, VAL342C, VAL353A
• A-D: ALA375A, ALA446A, ALA466A, ARG393A, ARG403A, ARG448A, ASN427A, ASN464A, ASP399A, ASP445A, ASP450A, CYS469A, GLN252D, GLN428A, GLN457A, GLU253D, GLY400A, GLY402A, GLY468A, ILE251D, ILE465A, LEU409A, LEU432A, LEU471A, LYS429A, PHE377A, PHE410A, PHE411A, PHE426A, PHE447A, PHE456A, PRO250D, PRO449A, PRO470A, SER408A, SER453A, SER454A, SER455A, SER467A, THR254D, THR401A, THR452A, TYR249D, TYR395A, VAL412A, VAL430A, VAL451A
• B-C: ALA334B, ALA334C, ALA336C, ALA347C, ALA380C, ALA420B, ALA489C, ALA494C, ARG326B, ARG385B, ARG423B, ARG458B, ARG486C, ASN418B, ASN438C, ASN439C, ASP332B, ASP332C, ASP337B, ASP337C, ASP351C, ASP419B, ASP436C, ASP487C, GLN323B, GLN340B, GLN340C, GLN437C, GLU325B, GLU325C, GLU339B, GLU339C, GLU344B, GLU344C, GLU346B, GLU346C, GLY329B, GLY329C, GLY352C, GLY387B, GLY416B, HIS442C, ILE328B, ILE328C, ILE355C, ILE490C, ILE492C, LEU324B, LEU324C, LEU330B, LEU333B, LEU338B, LEU338C, LEU343B, LEU343C, LEU421B, LEU422B, LEU435C, LYS331B, LYS331C, LYS341B, LYS341C, LYS357C, LYS389B, LYS415B, LYS493C, PHE354C, PHE381C, PHE491C, PRO379C, PRO417B, SER327B, SER327C, SER348B, SER348C, SER359C, SER384B, THR349C, TRP356C, TYR350B, TYR350C, TYR382B, TYR386B, TYR484C, VAL342B, VAL342C, VAL353C
• B-E: ALA375B, ALA446B, ALA466B, ARG393B, ARG403B, ARG448B, ASN464B, ASP399B, ASP445B, ASP450B, CYS469B, GLN252E, GLN457B, GLU253E, GLY400B, GLY402B, GLY468B, ILE251E, ILE465B, LEU409B, LEU432B, LEU471B, LYS429B, PHE377B, PHE410B, PHE411B, PHE447B, PHE456B, PRO250E, PRO449B, PRO470B, SER408B, SER453B, SER454B, SER455B, SER467B, THR254E, THR401B, THR452B, TYR249E, TYR395B, VAL412B, VAL430B, VAL451B
• C-F: ALA375C, ALA446C, ALA466C, ARG393C, ARG403C, ARG448C, ASN464C, ASP399C, ASP450C, CYS469C, GLN252F, GLN428C, GLN457C, GLU253F, GLY398C, GLY400C, GLY402C, GLY468C, ILE251F, ILE465C, LEU409C, LEU432C, LEU471C, LYS429C, PHE377C, PHE410C, PHE411C, PHE426C, PHE447C, PHE456C, PRO250F, PRO449C, PRO470C, SER408C, SER453C, SER454C, SER455C, SER467C, THR254F, THR401C, THR452C, TYR249F, TYR395C, VAL412C, VAL430C, VAL451C