1QO3

complex between nk cell receptor ly49a and its mhc class i ligand h-2dd

• Total interactions analyzed: 10
• Total true interactions: 5
• Strongest Interaction:
  • Chains: A-P
  • Int. Res.: 87
  • Norm. En. per Res.: -4.94
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-34.4278	-72.3143	-392.154	-498.8961	131	12	1	13883	5	33	34
A-C	-42.6982	-59.4829	-127.986	-230.1672	47	13	0	4350	9	19	17
A-P	-63.4747	-47.1634	-319.143	-429.7811	87	18	2	10640	4	17	20
C-D	-23.5768	-4.9099	-139.292	-167.7786	54	4	4	5035	0	8	5
C-P	0.0	0.0	-0.0047	-0.0047	2	0	0	2	0	1	0

Interface residues

• A-B: ALA117A, ALA11A, ALA125A, ALA205A, ALA236A, ALA66B, ALA99A, ARG111A, ARG12B, ARG14A, ARG181A, ARG202A, ARG21A, ARG234A, ARG35A, ARG48A, ARG6A, ARG97B, ASN24B, ASN30A, ASP102A, ASP119A, ASP122A, ASP137A, ASP183A, ASP238A, ASP37A, ASP53B, ASP59B, ASP96B, ASP98B, CYS121A, CYS25B, GLN115A, GLN242A, GLN29B, GLN2B, GLN6B, GLN87A, GLN8B, GLN96A, GLU229A, GLU232A, GLU24A, GLU32A, GLU50B, GLY120A, GLY207A, GLY237A, GLY239A, GLY91A, HIS13B, HIS188A, HIS191A, HIS192A, HIS31B, HIS34B, HIS67B, HIS93A, ILE124A, ILE1B, ILE22B, ILE64B, ILE7B, LEU206A, LEU230A, LEU23B, LEU65B, LEU95A, LYS186A, LYS243A, LYS3B, LYS58B, MET0B, MET23A, MET51B, MET54B, MET98A, MET99B, PHE116A, PHE208A, PHE241A, PHE30B, PHE36A, PHE56B, PHE62B, PHE8A, PRO14B, PRO15A, PRO15B, PRO235A, PRO32B, PRO33B, SER11B, SER13A, SER246A, SER4A, SER52B, SER55B, SER57B, SER61B, SER92A, THR10A, THR190A, THR200A, THR233A, THR240A, THR28B, THR94A, TRP114A, TRP204A, TRP244A, TRP60B, TRP95B, TRP97A, TYR10B, TYR113A, TYR118A, TYR123A, TYR22A, TYR26B, TYR27A, TYR63B, TYR7A, TYR85A, VAL12A, VAL231A, VAL25A, VAL27B, VAL9A, VAL9B
• A-C: ARG157C, ARG169A, ARG170A, ARG228C, ARG239C, ARG50A, ASN174A, ASN176A, ASN226C, ASN242C, ASN244C, ASP106A, ASP193C, ASP229C, ASP241C, ASP246C, CYS245C, GLN247C, GLN54A, GLU166A, GLU53A, GLU55A, GLU58A, GLY107A, GLY230C, GLY243C, GLY56A, ILE227C, ILE52A, LEU234C, LEU240C, LYS158C, LYS173A, PHE249C, PRO57A, SER192C, SER194C, THR159C, TRP167A, TRP196C, TRP51A, TRP60A, TYR171A, TYR225C, TYR59A, VAL165A, VAL248C
• A-P: ALA11A, ALA139A, ALA140A, ALA150A, ALA152A, ALA153A, ALA67A, ALA6P, ALA81A, ALA99A, ARG144A, ARG155A, ARG170A, ARG1P, ARG5P, ARG62A, ARG65A, ARG66A, ARG6A, ARG75A, ARG79A, ARG83A, ASN70A, ASP156A, ASP77A, CYS164A, GLN72A, GLN96A, GLU163A, GLU166A, GLU24A, GLU55A, GLU58A, GLU63A, GLU71A, GLY100A, GLY151A, GLY26A, GLY2P, GLY4P, GLY69A, ILE10P, ILE124A, ILE142A, ILE52A, LEU160A, LEU168A, LEU5A, LEU78A, LEU82A, LEU95A, LYS146A, LYS68A, MET98A, PHE116A, PHE33A, PHE74A, PHE7P, PHE8A, PRO3P, SER73A, THR143A, THR80A, THR9P, TRP114A, TRP133A, TRP147A, TRP167A, TRP60A, TRP97A, TYR113A, TYR118A, TYR123A, TYR159A, TYR171A, TYR22A, TYR45A, TYR59A, TYR7A, TYR84A, TYR85A, VAL25A, VAL28A, VAL34A, VAL76A, VAL8P, VAL9A
• C-D: ASP139D, ASP179C, ASP181C, ASP193D, CYS145C, CYS145D, CYS150C, CYS150D, GLN187C, GLU182C, GLY147C, GLY147D, ILE250D, LEU186C, LEU188C, LEU188D, LEU257C, LEU257D, LYS140C, LYS140D, LYS149C, LYS149D, LYS237C, LYS237D, MET148C, MET155C, MET155D, PHE144C, PHE144D, PHE153C, PHE153D, PHE185C, PHE185D, PRO191C, PRO191D, SER192C, SER192D, TRP143C, TRP143D, TYR142C, TYR142D, TYR146C, TYR146D, TYR151C, TYR151D, TYR152D, VAL128C, VAL141C, VAL141D, VAL154D, VAL189C, VAL189D, VAL190C, VAL190D
• C-P: ARG1P, ASP246C