1QDU
crystal structure of the complex of caspase-8 with the tripeptide ketone inhibitor zevd-dcbmk
Total interactions analyzed 153
Total true interactions 32
Strongest Interaction Chains J-X
Int. Res. 22
Norm. En. per Res. -7.3641
Hub Node A(5)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -181.8775 -11.9295 -641.206 -835.013 165 59 13 24745 3 35 33
A-T 0.0 -55.0332 26.8363 -28.1969 27 6 0 1359 4 11 9
A-C 0.0 -4.4203 -58.2543 -62.6746 53 2 6 3373 0 8 7
A-D -33.3694 -63.498 -126.975 -223.8424 47 25 3 4798 2 17 10
A-K 0.0 0.0 -0.0745 -0.0745 2 0 0 29 0 0 0
B-T -45.243 -54.549 -60.9501 -160.7421 22 7 2 2035 2 6 5
B-C -48.8505 -91.6142 -137.247 -277.7117 46 22 3 5047 8 18 9
B-D -36.7934 2.1273 -354.597 -389.263 106 23 1 14916 0 38 32
C-D -151.9366 -28.8376 -635.699 -816.4733 168 53 13 25159 2 35 34
C-U -20.6258 -48.1518 4.01 -64.7676 27 5 0 1378 3 11 9
D-U -29.7159 -55.9848 -66.3307 -152.0314 22 3 2 2045 2 7 5
E-F -152.1593 -10.0319 -628.429 -790.6202 164 44 13 24531 3 35 33
E-V 0.0 -55.1206 -4.3304 -59.451 27 6 0 1324 3 11 9
E-G 0.0 -4.3471 -58.5012 -62.8483 54 1 6 3408 0 8 7
E-H -33.4493 -61.5325 -130.132 -225.1138 47 21 3 4757 2 17 10
E-K -15.177 16.5171 -51.0176 -49.6775 39 0 0 2399 0 12 5
F-V -34.9483 -57.7267 -49.341 -142.016 21 6 2 2004 2 7 5
F-G -50.9136 -90.0717 -137.766 -278.7512 46 26 3 5043 6 18 9
F-H -41.503 1.9262 -348.269 -387.8458 105 29 1 14929 0 38 32
G-H -160.2751 -28.7597 -654.128 -843.1628 168 48 12 25051 2 35 34
G-W -20.7821 -47.2405 5.7593 -62.2633 28 11 0 1296 3 12 9
H-W -29.2797 -52.123 -64.5165 -145.9192 24 4 2 2076 2 8 5
I-J -151.0034 -9.7861 -632.207 -792.9965 165 51 13 24621 3 35 33
I-X 0.0 -53.9592 -23.026 -76.9852 26 5 0 1382 3 11 9
I-K 0.0 -4.4924 -57.9721 -62.4645 53 3 6 3366 0 8 7
I-L -32.4333 -61.9675 -131.282 -225.6829 45 23 3 4763 2 16 10
J-X -40.9369 -56.1994 -64.8747 -162.0111 22 3 2 2081 2 8 5
J-K -43.8989 -88.9133 -132.792 -265.6042 46 27 3 5028 6 18 9
J-L -40.657 2.2643 -348.864 -387.2567 105 24 1 14884 0 38 32
K-L -162.972 -27.4829 -663.019 -853.4739 168 57 13 25332 2 35 34
K-Y -22.3344 -49.065 14.4997 -56.8997 28 7 0 1380 3 12 9
L-Y -30.0488 -58.4391 -53.6395 -142.1274 21 4 2 1998 2 6 5