1PDL

fitting of gp5 in the cryoem reconstruction of the bacteriophage t4 baseplate

• Total interactions analyzed: 3
• Total true interactions: 3
• Strongest Interaction:
  • Chains: A-C
  • Int. Res.: 431
  • Norm. En. per Res.: -0.2222
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	0.0	0.0	-96.1073	-96.1073	437	0	0	13812	0	0	0
A-C	0.0	0.0	-95.7551	-95.7551	431	0	0	13813	0	0	0
B-C	0.0	0.0	-95.9816	-95.9816	439	0	0	13819	0	0	0

Interface residues

• A-B: ALA155B, ALA290B, ALA364A, ALA444A, ALA444B, ALA451A, ALA451B, ALA510A, ALA510B, ALA518A, ALA518B, ALA539A, ALA539B, ALA555A, ALA555B, ALA64B, ALA65B, ARG123A, ARG124A, ARG18B, ARG323B, ARG411A, ARG429A, ARG430A, ARG432A, ARG470A, ARG470B, ARG483A, ARG483B, ARG571A, ARG571B, ASN127A, ASN130A, ASN133A, ASN157A, ASN232B, ASN437A, ASN437B, ASN443A, ASN443B, ASN447A, ASN447B, ASN457A, ASN457B, ASN466A, ASN466B, ASN469A, ASN469B, ASN478A, ASN478B, ASN493A, ASN493B, ASN501A, ASN501B, ASN509A, ASN509B, ASN525A, ASN525B, ASN528A, ASN528B, ASN531A, ASN531B, ASN533A, ASN533B, ASN7B, ASN9A, ASP128A, ASP153A, ASP153B, ASP159B, ASP160B, ASP313B, ASP362A, ASP365A, ASP404A, ASP405A, ASP436A, ASP436B, ASP440A, ASP440B, ASP445A, ASP445B, ASP453A, ASP453B, ASP468A, ASP468B, ASP475A, ASP475B, ASP485A, ASP485B, ASP511A, ASP511B, ASP517A, ASP517B, ASP543A, ASP543B, ASP545A, ASP545B, ASP549A, ASP549B, ASP568A, ASP568B, ASP573B, GLN134A, GLN318B, GLN319B, GLN473A, GLN473B, GLN526A, GLN526B, GLN564A, GLN564B, GLN59A, GLN59B, GLU378A, GLU394A, GLU396A, GLU396B, GLU410A, GLU462A, GLU462B, GLU486A, GLU486B, GLU491A, GLU491B, GLU507A, GLU507B, GLU523A, GLU523B, GLU552A, GLU552B, GLU78A, GLY101A, GLY102A, GLY126A, GLY231B, GLY25B, GLY288B, GLY311B, GLY322A, GLY322B, GLY398B, GLY408A, GLY419B, GLY428A, GLY446A, GLY446B, GLY452A, GLY452B, GLY459A, GLY459B, GLY460A, GLY460B, GLY476A, GLY476B, GLY484A, GLY484B, GLY492A, GLY492B, GLY494A, GLY494B, GLY500A, GLY500B, GLY508A, GLY508B, GLY516A, GLY516B, GLY524A, GLY524B, GLY532A, GLY532B, GLY540A, GLY540B, GLY547A, GLY547B, GLY548A, GLY548B, GLY563A, GLY563B, GLY569A, GLY569B, GLY575B, GLY68B, GLY70B, GLY71A, GLY71B, GLY75A, GLY75B, GLY79A, GLY98A, HIS391A, HIS399B, HIS416B, HIS472A, HIS472B, ILE103A, ILE156A, ILE368A, ILE441A, ILE441B, ILE463A, ILE463B, ILE474A, ILE474B, ILE480A, ILE480B, ILE496A, ILE496B, ILE504A, ILE504B, ILE505A, ILE505B, ILE512A, ILE512B, ILE560A, ILE560B, ILE567A, ILE567B, ILE572A, ILE572B, ILE574B, ILE58A, ILE58B, ILE61B, ILE69B, LEU125A, LEU22B, LEU24B, LEU315B, LEU438A, LEU438B, LEU449A, LEU449B, LEU471A, LEU471B, LEU497A, LEU497B, LEU521A, LEU521B, LEU534A, LEU534B, LEU87B, LEU8A, LEU8B, LEU97A, LEU97B, LYS23B, LYS291B, LYS321B, LYS377B, LYS433A, LYS454A, LYS454B, LYS455A, LYS455B, LYS488A, LYS488B, LYS499A, LYS499B, LYS515A, LYS515B, LYS537A, LYS537B, LYS553A, LYS553B, MET19B, MET214B, MET284B, MET393A, MET467A, MET467B, MET554A, MET554B, MET557A, MET557B, MET66B, PHE292B, PHE376B, PHE403A, PHE448A, PHE448B, PHE481A, PHE481B, PRO122A, PRO158A, PRO158B, PRO162A, PRO233B, PRO363A, PRO366A, PRO367A, PRO379A, PRO388A, PRO407A, PRO417B, PRO426A, PRO60A, PRO60B, PRO76A, SER314B, SER325A, SER397B, SER425A, SER427A, SER461A, SER461B, SER477A, SER477B, SER535A, SER535B, SER556A, SER556B, SER558A, SER558B, SER559A, SER559B, SER561A, SER561B, SER562A, SER562B, SER56B, SER570A, SER570B, SER63B, SER67B, SER72A, SER72B, THR129A, THR154B, THR320B, THR392A, THR395A, THR395B, THR406A, THR418B, THR420B, THR431A, THR434A, THR434B, THR442A, THR442B, THR456A, THR456B, THR479A, THR479B, THR487A, THR487B, THR489A, THR489B, THR495A, THR495B, THR503A, THR503B, THR513A, THR513B, THR519A, THR519B, THR520A, THR520B, THR527A, THR527B, THR529A, THR529B, THR541A, THR541B, THR551A, THR551B, THR566A, THR566B, THR62B, THR74A, THR74B, THR80A, THR99A, TRP10A, TRP192B, TRP316B, TRP536A, TRP536B, TRP544A, TRP544B, TRP550A, TRP550B, TYR100A, TYR121A, TYR191B, TYR317B, TYR387A, TYR389A, TYR412A, TYR439A, TYR439B, TYR464A, TYR464B, TYR465A, TYR465B, TYR565A, TYR565B, TYR83A, VAL131A, VAL289B, VAL390A, VAL424A, VAL435A, VAL435B, VAL450A, VAL450B, VAL458A, VAL458B, VAL482A, VAL482B, VAL490A, VAL490B, VAL498A, VAL498B, VAL502A, VAL502B, VAL506A, VAL506B, VAL514A, VAL514B, VAL522A, VAL522B, VAL530A, VAL530B, VAL538A, VAL538B, VAL542A, VAL542B, VAL546A, VAL546B, VAL57A, VAL57B, VAL73A, VAL73B, VAL77A, VAL82A
• A-C: ALA155A, ALA364C, ALA444A, ALA444C, ALA451A, ALA451C, ALA510A, ALA510C, ALA518A, ALA518C, ALA539A, ALA539C, ALA555A, ALA555C, ALA64A, ALA65A, ARG123C, ARG124C, ARG312A, ARG323A, ARG326C, ARG411C, ARG429C, ARG430C, ARG432C, ARG470A, ARG470C, ARG483A, ARG483C, ARG571A, ASN127C, ASN130C, ASN133C, ASN157C, ASN232A, ASN437A, ASN437C, ASN443A, ASN443C, ASN447A, ASN447C, ASN457A, ASN457C, ASN466A, ASN466C, ASN469A, ASN469C, ASN478A, ASN478C, ASN493A, ASN493C, ASN501A, ASN501C, ASN509A, ASN509C, ASN525A, ASN525C, ASN528A, ASN528C, ASN531A, ASN531C, ASN533A, ASN533C, ASN7A, ASN9C, ASP128C, ASP153C, ASP159A, ASP160A, ASP313A, ASP362C, ASP365C, ASP404C, ASP405C, ASP436A, ASP436C, ASP440A, ASP440C, ASP445A, ASP445C, ASP453A, ASP453C, ASP468A, ASP468C, ASP475A, ASP475C, ASP485A, ASP485C, ASP511A, ASP511C, ASP517A, ASP517C, ASP543A, ASP543C, ASP545A, ASP545C, ASP549A, ASP549C, ASP568A, ASP568C, ASP573A, GLN134C, GLN318A, GLN319A, GLN473A, GLN473C, GLN526A, GLN526C, GLN564A, GLN564C, GLN59A, GLN59C, GLU378C, GLU394C, GLU396A, GLU396C, GLU410C, GLU462A, GLU462C, GLU486A, GLU486C, GLU491A, GLU491C, GLU507A, GLU507C, GLU523A, GLU523C, GLU552A, GLU552C, GLY101C, GLY102C, GLY126C, GLY288A, GLY311A, GLY322A, GLY398A, GLY408C, GLY419A, GLY428C, GLY446A, GLY446C, GLY452A, GLY452C, GLY459A, GLY459C, GLY460A, GLY460C, GLY476A, GLY476C, GLY484A, GLY484C, GLY492A, GLY492C, GLY494A, GLY494C, GLY500A, GLY500C, GLY508A, GLY508C, GLY516A, GLY516C, GLY524A, GLY524C, GLY532A, GLY532C, GLY540A, GLY540C, GLY547A, GLY547C, GLY548A, GLY548C, GLY563A, GLY563C, GLY569A, GLY569C, GLY575A, GLY68A, GLY70A, GLY71A, GLY71C, GLY75A, GLY75C, GLY79C, GLY98C, HIS391C, HIS399A, HIS416A, HIS472A, HIS472C, ILE103C, ILE156C, ILE368C, ILE400A, ILE441A, ILE441C, ILE463A, ILE463C, ILE474A, ILE474C, ILE480A, ILE480C, ILE496A, ILE496C, ILE504A, ILE504C, ILE505A, ILE505C, ILE512A, ILE512C, ILE560A, ILE560C, ILE567A, ILE567C, ILE572A, ILE572C, ILE574A, ILE58A, ILE58C, ILE61A, ILE69A, LEU125C, LEU22A, LEU24A, LEU315A, LEU438A, LEU438C, LEU449A, LEU449C, LEU471A, LEU471C, LEU497A, LEU497C, LEU521A, LEU521C, LEU534A, LEU534C, LEU87A, LEU8A, LEU8C, LEU97A, LEU97C, LYS23A, LYS291A, LYS321A, LYS377C, LYS433C, LYS454A, LYS454C, LYS455A, LYS455C, LYS488A, LYS488C, LYS499A, LYS499C, LYS515A, LYS515C, LYS537A, LYS537C, LYS553A, LYS553C, MET19A, MET214A, MET284A, MET393C, MET467A, MET467C, MET554A, MET554C, MET557A, MET557C, MET66A, PHE292A, PHE376A, PHE403C, PHE448A, PHE448C, PHE481A, PHE481C, PRO122C, PRO158A, PRO158C, PRO233A, PRO363C, PRO366C, PRO367C, PRO379C, PRO388C, PRO407C, PRO417A, PRO426C, PRO60A, PRO60C, PRO76C, SER314A, SER325C, SER397A, SER425C, SER427C, SER461A, SER461C, SER477A, SER477C, SER535A, SER535C, SER556A, SER556C, SER558A, SER558C, SER559A, SER559C, SER561A, SER561C, SER562A, SER562C, SER56A, SER570A, SER63A, SER67A, SER72A, SER72C, THR129C, THR154A, THR320A, THR392C, THR395A, THR395C, THR406C, THR418A, THR420A, THR431C, THR434A, THR434C, THR442A, THR442C, THR456A, THR456C, THR479A, THR479C, THR487A, THR487C, THR489A, THR489C, THR495A, THR495C, THR503A, THR503C, THR513A, THR513C, THR519A, THR519C, THR520A, THR520C, THR527A, THR527C, THR529A, THR529C, THR541A, THR541C, THR551A, THR551C, THR566A, THR566C, THR62A, THR74A, THR74C, THR80C, THR99C, TRP10C, TRP192A, TRP316A, TRP536A, TRP536C, TRP544A, TRP544C, TRP550A, TRP550C, TYR100C, TYR121C, TYR191A, TYR317A, TYR387C, TYR389C, TYR412C, TYR439A, TYR439C, TYR464A, TYR464C, TYR465A, TYR465C, TYR565A, TYR565C, TYR83C, VAL131C, VAL289A, VAL390C, VAL424C, VAL435A, VAL435C, VAL450A, VAL450C, VAL458A, VAL458C, VAL482A, VAL482C, VAL490A, VAL490C, VAL498A, VAL498C, VAL502A, VAL502C, VAL506A, VAL506C, VAL514A, VAL514C, VAL522A, VAL522C, VAL530A, VAL530C, VAL538A, VAL538C, VAL542A, VAL542C, VAL546A, VAL546C, VAL57A, VAL57C, VAL73A, VAL73C, VAL77C, VAL82C, VAL96C
• B-C: ALA155C, ALA290C, ALA364B, ALA444B, ALA444C, ALA451B, ALA451C, ALA510B, ALA510C, ALA518B, ALA518C, ALA539B, ALA539C, ALA555B, ALA555C, ALA64C, ALA65C, ARG123B, ARG124B, ARG18C, ARG323C, ARG326B, ARG411B, ARG429B, ARG430B, ARG432B, ARG470B, ARG470C, ARG483B, ARG483C, ARG571B, ARG571C, ARG81B, ASN127B, ASN130B, ASN133B, ASN157B, ASN232C, ASN437B, ASN437C, ASN443B, ASN443C, ASN447B, ASN447C, ASN457B, ASN457C, ASN466B, ASN466C, ASN469B, ASN469C, ASN478B, ASN478C, ASN493B, ASN493C, ASN501B, ASN501C, ASN509B, ASN509C, ASN525B, ASN525C, ASN528B, ASN528C, ASN531B, ASN531C, ASN533B, ASN533C, ASN7C, ASN9B, ASP128B, ASP153B, ASP153C, ASP160C, ASP313C, ASP362B, ASP365B, ASP404B, ASP405B, ASP436B, ASP436C, ASP440B, ASP440C, ASP445B, ASP445C, ASP453B, ASP453C, ASP468B, ASP468C, ASP475B, ASP475C, ASP485B, ASP485C, ASP511B, ASP511C, ASP517B, ASP517C, ASP543B, ASP543C, ASP545B, ASP545C, ASP549B, ASP549C, ASP568B, ASP568C, ASP573C, GLN134B, GLN318C, GLN319C, GLN473B, GLN473C, GLN526B, GLN526C, GLN564B, GLN564C, GLN59B, GLN59C, GLU378B, GLU394B, GLU396B, GLU396C, GLU410B, GLU462B, GLU462C, GLU486B, GLU486C, GLU491B, GLU491C, GLU507B, GLU507C, GLU523B, GLU523C, GLU552B, GLU552C, GLU78B, GLY101B, GLY102B, GLY126B, GLY231C, GLY25C, GLY288C, GLY311C, GLY322B, GLY322C, GLY398C, GLY408B, GLY419C, GLY428B, GLY446B, GLY446C, GLY452B, GLY452C, GLY459B, GLY459C, GLY460B, GLY460C, GLY476B, GLY476C, GLY484B, GLY484C, GLY492B, GLY492C, GLY494B, GLY494C, GLY500B, GLY500C, GLY508B, GLY508C, GLY516B, GLY516C, GLY524B, GLY524C, GLY532B, GLY532C, GLY540B, GLY540C, GLY547B, GLY547C, GLY548B, GLY548C, GLY563B, GLY563C, GLY569B, GLY569C, GLY575C, GLY68C, GLY70C, GLY71B, GLY71C, GLY75B, GLY75C, GLY79B, GLY98B, HIS391B, HIS399C, HIS416C, HIS472B, HIS472C, ILE103B, ILE156B, ILE368B, ILE441B, ILE441C, ILE463B, ILE463C, ILE474B, ILE474C, ILE480B, ILE480C, ILE496B, ILE496C, ILE504B, ILE504C, ILE505B, ILE505C, ILE512B, ILE512C, ILE560B, ILE560C, ILE567B, ILE567C, ILE572B, ILE572C, ILE574C, ILE58B, ILE58C, ILE61C, ILE69C, LEU125B, LEU22C, LEU24C, LEU315C, LEU375B, LEU438B, LEU438C, LEU449B, LEU449C, LEU471B, LEU471C, LEU497B, LEU497C, LEU521B, LEU521C, LEU534B, LEU534C, LEU87C, LEU8B, LEU8C, LEU97B, LEU97C, LYS23C, LYS291C, LYS321C, LYS377B, LYS377C, LYS433B, LYS454B, LYS454C, LYS455B, LYS455C, LYS488B, LYS488C, LYS499B, LYS499C, LYS515B, LYS515C, LYS537B, LYS537C, LYS553B, LYS553C, MET19C, MET214C, MET284C, MET393B, MET467B, MET467C, MET554B, MET554C, MET557B, MET557C, MET66C, PHE292C, PHE376C, PHE403B, PHE448B, PHE448C, PHE481B, PHE481C, PRO122B, PRO158B, PRO158C, PRO162B, PRO233C, PRO363B, PRO366B, PRO367B, PRO379B, PRO388B, PRO407B, PRO417C, PRO426B, PRO60B, PRO60C, PRO76B, SER314C, SER325B, SER397C, SER427B, SER461B, SER461C, SER477B, SER477C, SER535B, SER535C, SER556B, SER556C, SER558B, SER558C, SER559B, SER559C, SER561B, SER561C, SER562B, SER562C, SER56C, SER570B, SER570C, SER63C, SER67C, SER72B, SER72C, THR129B, THR154C, THR320C, THR392B, THR395B, THR395C, THR406B, THR418C, THR420C, THR431B, THR434B, THR434C, THR442B, THR442C, THR456B, THR456C, THR479B, THR479C, THR487B, THR487C, THR489B, THR489C, THR495B, THR495C, THR503B, THR503C, THR513B, THR513C, THR519B, THR519C, THR520B, THR520C, THR527B, THR527C, THR529B, THR529C, THR541B, THR541C, THR551B, THR551C, THR566B, THR566C, THR62C, THR74B, THR74C, THR80B, THR99B, TRP10B, TRP192C, TRP316C, TRP536B, TRP536C, TRP544B, TRP544C, TRP550B, TRP550C, TYR100B, TYR121B, TYR191C, TYR317C, TYR387B, TYR389B, TYR412B, TYR439B, TYR439C, TYR464B, TYR464C, TYR465B, TYR465C, TYR565B, TYR565C, TYR83B, VAL131B, VAL289C, VAL390B, VAL424B, VAL435B, VAL435C, VAL450B, VAL450C, VAL458B, VAL458C, VAL482B, VAL482C, VAL490B, VAL490C, VAL498B, VAL498C, VAL502B, VAL502C, VAL506B, VAL506C, VAL514B, VAL514C, VAL522B, VAL522C, VAL530B, VAL530C, VAL538B, VAL538C, VAL542B, VAL542C, VAL546B, VAL546C, VAL57B, VAL57C, VAL73B, VAL73C, VAL77B, VAL82B