1P4L

crystal structure of nk receptor ly49c mutant with its mhc class i ligand h-2kb

• Total interactions analyzed: 6
• Total true interactions: 4
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 118
  • Norm. En. per Res.: -3.7353
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-40.0726	-79.5858	-321.11	-440.7685	118	23	1	11391	6	33	30
A-P	-47.8442	1.2448	-255.746	-302.3454	83	24	4	9619	0	11	11
A-D	-26.9643	-27.2372	-176.334	-230.5355	127	13	4	8551	3	60	42
B-D	-9.8188	-20.5909	-56.2105	-86.6202	42	10	0	2884	1	7	9

Interface residues

• A-B: ALA117A, ALA11A, ALA125A, ALA236A, ALA40A, ALA66B, ARG111A, ARG12B, ARG14A, ARG202A, ARG21A, ARG234A, ARG35A, ARG48A, ARG6A, ARG97B, ASN24B, ASP119A, ASP122A, ASP238A, ASP30A, ASP37A, ASP53B, ASP59B, ASP96B, ASP98B, CYS121A, CYS25B, GLN114A, GLN115A, GLN242A, GLN29B, GLN2B, GLN6B, GLN87A, GLN8B, GLN96A, GLU102A, GLU229A, GLU232A, GLU24A, GLU32A, GLY120A, GLY207A, GLY237A, GLY239A, HIS13B, HIS188A, HIS191A, HIS192A, HIS31B, HIS34B, HIS67B, HIS93A, ILE124A, ILE1B, ILE22B, ILE64B, ILE7B, ILE95A, ILE98A, LEU206A, LEU230A, LEU23B, LEU65B, LYS243A, LYS3B, LYS58B, MET23A, MET51B, MET54B, MET99B, PHE241A, PHE30B, PHE56B, PHE62B, PHE8A, PRO14B, PRO15B, PRO235A, PRO32B, PRO33B, SER11B, SER13A, SER193A, SER246A, SER52B, SER55B, SER57B, SER61B, SER92A, SER99A, THR10A, THR190A, THR200A, THR233A, THR240A, THR28B, THR94A, TRP204A, TRP244A, TRP60B, TRP95B, TYR10B, TYR113A, TYR116A, TYR118A, TYR123A, TYR26B, TYR27A, TYR63B, TYR7A, VAL12A, VAL231A, VAL25A, VAL97A, VAL9A, VAL9B
• A-P: ALA117A, ALA11A, ALA139A, ALA140A, ALA150A, ALA153A, ALA158A, ALA67A, ARG155A, ARG157A, ARG170A, ARG62A, ARG6A, ARG75A, ARG79A, ASN4P, ASN70A, ASP77A, CYS164A, GLN114A, GLN115A, GLN72A, GLN96A, GLU152A, GLU24A, GLU63A, GLU6P, GLU71A, GLY100A, GLY151A, GLY26A, GLY69A, ILE124A, ILE142A, ILE2P, ILE3P, ILE95A, ILE98A, LEU156A, LEU160A, LEU168A, LEU5A, LEU78A, LEU81A, LEU8P, LYS144A, LYS146A, LYS66A, LYS7P, MET23A, MET52A, PHE33A, PHE36A, PHE5P, PHE74A, PHE8A, SER1P, SER73A, SER99A, THR10A, THR143A, THR163A, THR80A, TRP133A, TRP147A, TRP167A, TYR113A, TYR116A, TYR118A, TYR123A, TYR159A, TYR171A, TYR22A, TYR45A, TYR59A, TYR7A, TYR84A, TYR85A, VAL25A, VAL34A, VAL76A, VAL97A, VAL9A
• A-D: ALA117A, ALA125A, ALA135A, ALA136A, ALA140A, ALA165D, ALA211A, ALA238D, ARG108A, ARG111A, ARG188D, ARG230D, ARG239D, ARG6A, ASN127A, ASN166D, ASN194D, ASN226D, ASN246D, ASP119A, ASP122A, ASP129A, ASP137A, ASP212A, ASP219D, ASP227A, ASP242D, ASP244D, ASP29A, CYS121A, CYS163D, CYS245D, GLN114A, GLN115A, GLN168D, GLN187D, GLN218A, GLN226A, GLN264A, GLN96A, GLU102A, GLU128A, GLU222A, GLU223A, GLU229A, GLU232A, GLU241D, GLU268A, GLY104A, GLY112A, GLY120A, GLY162D, GLY193D, GLY231D, GLY265A, HIS260A, HIS263A, HIS3A, ILE124A, ILE191D, ILE213A, ILE222D, ILE225A, ILE240D, ILE243D, ILE247D, ILE98A, LEU109A, LEU110A, LEU126A, LEU130A, LEU141A, LEU179A, LEU180A, LEU183D, LEU215A, LEU230A, LEU235D, LEU266A, LYS164D, LYS184D, LYS203D, LYS204D, LYS221D, LYS223D, LYS224D, LYS228D, LYS237D, LYS243A, MET138A, MET220D, MET225D, MET228A, PHE227D, PHE234D, PHE8A, PRO192D, PRO210A, PRO248D, PRO267A, PRO269A, PRO2A, SER105A, SER161D, SER229D, SER236D, SER4A, THR132A, THR134A, THR158D, THR159D, THR182A, THR214A, THR216A, THR233A, TRP133A, TRP160D, TYR113A, TYR116A, TYR118A, TYR123A, TYR201D, TYR262A, VAL103A, VAL231A, VAL261A, VAL97A
• B-D: ALA238D, ARG239D, ASN194D, ASN246D, ASP242D, ASP244D, ASP59B, CYS232D, GLN29B, GLN2B, GLN6B, GLU241D, GLY193D, ILE191D, ILE1B, ILE222D, ILE240D, ILE243D, ILE247D, LYS157D, LYS223D, LYS224D, LYS3B, LYS58B, LYS91B, MET225D, PHE234D, PHE56B, PRO192D, PRO248D, PRO5B, SER236D, SER57B, SER61B, THR28B, THR4B, TRP196D, TRP208D, TRP60B, TYR249D, TYR250D, TYR63B