1P4B

three-dimensional structure of a single chain fv fragment complexed with the peptide gcn4(7p-14p).

• Total interactions analyzed: 3
• Total true interactions: 3
• Strongest Interaction:
  • Chains: H-P
  • Int. Res.: 37
  • Norm. En. per Res.: -4.9314
• Hub Node: L(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
L-H	0.0	2.0826	-203.13	-201.0474	85	3	6	8119	0	9	11
L-P	0.0	0.0	-65.4802	-65.4802	39	2	2	2895	0	2	4
H-P	-27.4971	-50.905	-104.059	-182.4611	37	6	1	3857	6	13	7

Interface residues

• L-H: ALA0L, ALA107L, ALA41L, ALA71L, ALA73H, ARG103H, ARG45H, ARG70L, ASN135L, ASN39L, ASN42H, ASN68L, ASN69L, ASN71H, ASP137H, ASP1H, ASP1L, ASP49L, ASP69H, CYS106L, GLN141H, GLN45L, GLN46H, GLN6L, GLU46L, GLU53H, GLY109H, GLY140H, GLY140L, GLY141L, GLY142H, GLY142L, GLY49H, GLY51H, GLY54L, GLY56H, GLY57L, GLY58L, GLY73L, HIS136L, HIS50L, ILE103L, ILE56L, ILE67H, LEU108L, LEU110H, LEU51L, LEU52H, LEU55H, LEU55L, LYS50H, LYS75H, PHE105L, PHE136H, PHE139L, PHE52L, PRO48H, PRO72L, SER111L, SER42L, SER47H, SER72H, THR108H, THR53L, THR67L, THR68H, TRP109L, TRP137L, TRP139H, TRP43H, TRP43L, TRP54H, TRP59H, TYR104L, TYR105H, TYR138H, TYR40L, TYR70H, VAL107H, VAL138L, VAL2H, VAL44H, VAL44L, VAL57H, VAL74L
• L-P: ALA1P, ALA41L, ALA71L, ALA8P, ARG70L, ARG9P, ASN135L, ASN39L, ASN5P, ASN68L, ASN69L, GLU4P, GLU6P, GLY54L, GLY57L, GLY58L, GLY73L, HIS136L, HIS2P, ILE56L, LEU108L, LEU10P, LEU3P, LEU55L, LYS11P, LYS12P, PRO72L, SER111L, SER38L, SER42L, THR33L, THR67L, TRP109L, TRP137L, TRP43L, TYR110L, TYR40L, VAL74L, VAL7P
• H-P: ALA1P, ALA8P, ARG9P, ASN42H, ASN5P, ASP137H, ASP33H, ASP65H, ASP69H, GLU4P, GLU6P, GLY109H, GLY27H, GLY40H, GLY60H, GLY66H, HIS2P, ILE67H, LEU10P, LEU110H, LEU3P, LEU4H, LYS11P, LYS12P, PHE136H, PHE29H, THR108H, THR32H, THR68H, TRP59H, TYR138H, TYR39H, VAL107H, VAL2H, VAL41H, VAL57H, VAL7P