1OGD

the structure of bacillus subtilis rbsd complexed with d-ribose

• Total interactions analyzed: 10
• Total true interactions: 5
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 44
  • Norm. En. per Res.: -3.3092
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-27.4688	-23.773	-94.365	-145.6068	44	2	1	3192	3	16	17
A-E	-27.1885	-21.6944	-90.7017	-139.5846	45	2	2	3150	3	16	17
B-C	-24.7071	-20.1456	-90.8426	-135.6952	45	1	1	3173	3	16	17
C-D	-23.1849	-21.4563	-87.2222	-131.8634	46	2	1	3170	3	16	17
D-E	-28.3625	-21.1542	-89.0592	-138.5758	46	2	2	3177	3	16	17

Interface residues

• A-B: ALA108A, ALA121B, ALA127A, ALA16A, ALA27B, ALA29B, ARG113B, ASN122B, ASN77B, ASP107A, ASP17A, ASP22A, ASP28B, ASP35B, ASP41B, GLU116B, GLU99B, GLY115B, GLY128A, GLY19A, GLY30B, GLY36B, HIS20A, HIS98B, LEU130A, LEU15A, LEU18A, LEU31B, LYS102B, LYS106A, LYS109A, LYS13A, LYS39B, PHE117B, PHE131A, PRO119B, PRO32B, PRO34B, PRO46B, THR118B, THR21A, TYR120B, VAL129A, VAL33B
• A-E: ALA108E, ALA121A, ALA127E, ALA16E, ALA27A, ALA29A, ARG113A, ASN122A, ASN77A, ASP107E, ASP17E, ASP22E, ASP28A, ASP35A, ASP41A, GLU116A, GLU99A, GLY115A, GLY128E, GLY19E, GLY30A, GLY36A, HIS20E, HIS98A, ILE14E, LEU130E, LEU15E, LEU18E, LEU31A, LYS102A, LYS106E, LYS109E, LYS13E, LYS39A, PHE117A, PHE131E, PRO119A, PRO32A, PRO34A, PRO46A, THR118A, THR21E, TYR120A, VAL129E, VAL33A
• B-C: ALA108B, ALA121C, ALA127B, ALA16B, ALA27C, ALA29C, ARG113C, ASN122C, ASN77C, ASP107B, ASP17B, ASP22B, ASP28C, ASP35C, ASP41C, GLU116C, GLU99C, GLY115C, GLY128B, GLY19B, GLY30C, GLY36C, HIS20B, HIS98C, ILE14B, LEU130B, LEU15B, LEU18B, LEU31C, LYS102C, LYS106B, LYS109B, LYS13B, LYS39C, PHE117C, PHE131B, PRO119C, PRO32C, PRO34C, PRO46C, THR118C, THR21B, TYR120C, VAL129B, VAL33C
• C-D: ALA108C, ALA121D, ALA127C, ALA16C, ALA27D, ALA29D, ARG113D, ASN122D, ASN77D, ASP107C, ASP17C, ASP22C, ASP28D, ASP35D, ASP41D, GLU116D, GLU99D, GLY115D, GLY128C, GLY19C, GLY30D, GLY36D, HIS20C, HIS98D, LEU130C, LEU15C, LEU18C, LEU31D, LYS102D, LYS106C, LYS109C, LYS13C, LYS23C, LYS39D, PHE117D, PHE131C, PRO119D, PRO32D, PRO34D, PRO46D, THR114D, THR118D, THR21C, TYR120D, VAL129C, VAL33D
• D-E: ALA108D, ALA121E, ALA127D, ALA16D, ALA27E, ALA29E, ARG113E, ASN122E, ASN77E, ASP107D, ASP17D, ASP22D, ASP28E, ASP35E, ASP41E, GLU116E, GLU99E, GLY115E, GLY128D, GLY19D, GLY30E, GLY36E, HIS20D, HIS98E, ILE14D, LEU130D, LEU15D, LEU18D, LEU31E, LYS102E, LYS106D, LYS109D, LYS13D, LYS39E, PHE117E, PHE131D, PRO119E, PRO32E, PRO34E, PRO46E, THR118E, THR21D, TYR120E, VAL129D, VAL33E, VAL37D