1NT9
complete 12-subunit rna polymerase ii
Total interactions analyzed 66
Total true interactions 24
Strongest Interaction Chains A-I
Int. Res. 59
Norm. En. per Res. -0.1717
Hub Node A(8)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B 0.0 0.0 -43.4279 -43.4279 382 0 0 7614 0 0 0
A-C 0.0 0.0 -0.0588 -0.0588 9 0 0 42 0 0 0
A-E 0.0 0.0 -9.6408 -9.6408 91 0 0 1493 0 0 0
A-F 0.0 0.0 -7.3639 -7.3639 80 0 0 1334 0 0 0
A-G 0.0 0.0 -1.5105 -1.5105 17 0 0 249 0 0 0
A-H 0.0 0.0 -6.7551 -6.7551 62 0 0 991 0 0 0
A-I 0.0 0.0 -10.1301 -10.1301 59 0 0 1294 0 0 0
A-K 0.0 0.0 -3.4196 -3.4196 41 0 0 536 0 0 0
B-C 0.0 0.0 -5.4632 -5.4632 65 0 0 897 0 0 0
B-F 0.0 0.0 -0.0228 -0.0228 5 0 0 16 0 0 0
B-G 0.0 0.0 -0.1058 -0.1058 6 0 0 45 0 0 0
B-I 0.0 0.0 -5.217 -5.217 57 0 0 857 0 0 0
B-J 0.0 0.0 -5.6477 -5.6477 72 0 0 1056 0 0 0
B-K 0.0 0.0 -0.1672 -0.1672 13 0 0 61 0 0 0
B-L 0.0 0.0 -4.3901 -4.3901 36 0 0 725 0 0 0
C-H 0.0 0.0 -0.1438 -0.1438 6 0 0 55 0 0 0
C-J 0.0 0.0 -4.2627 -4.2627 48 0 0 587 0 0 0
C-K 0.0 0.0 -3.7346 -3.7346 72 0 0 911 0 0 0
C-L 0.0 0.0 -3.346 -3.346 21 0 0 584 0 0 0
D-G 0.0 0.0 -1.8317 -1.8317 48 0 0 437 0 0 0
E-F 0.0 0.0 -0.1302 -0.1302 5 0 0 35 0 0 0
F-G 0.0 0.0 -0.2244 -0.2244 11 0 0 120 0 0 0
H-K 0.0 0.0 -0.1274 -0.1274 7 0 0 48 0 0 0
J-L 0.0 0.0 -0.0664 -0.0664 4 0 0 27 0 0 0