1NMC

complex between nc10 anti-influenza virus neuraminidase single chain antibody with a 15 residue linker and influenza virus neuraminidase

• Total interactions analyzed: 15
• Total true interactions: 6
• Strongest Interaction:
  • Chains: H-L
  • Int. Res.: 81
  • Norm. En. per Res.: -2.8255
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
N-H	-19.2355	-11.6122	-82.8147	-113.6624	45	1	2	3130	1	10	7
N-L	-20.1559	0.0	-79.3809	-99.5368	39	1	1	3163	0	3	4
H-L	-19.9636	-3.8192	-205.083	-228.8658	81	5	5	7807	0	8	8
A-B	-19.2339	-11.6088	-82.8192	-113.6619	45	1	2	3131	1	10	7
A-C	-20.1373	0.0	-79.3834	-99.5207	39	1	1	3162	0	3	4
B-C	-19.9767	-3.8196	-205.059	-228.8553	81	5	5	7807	0	8	8

Interface residues

• N-H: ALA369N, ARG100H, ARG327N, ARG371N, ASN31H, ASN325N, ASN329N, ASN33H, ASN400N, ASN54H, ASP100H, ASP330N, ASP402N, ASP56H, GLU433N, GLY100H, GLY373N, GLY53H, GLY55H, ILE366N, ILE368N, ILE50H, LEU399N, LYS432N, LYS73H, PRO328N, PRO431N, PRO52H, SER367N, SER370N, SER372N, SER404N, SER58H, SER98H, THR30H, THR401N, THR57H, TRP403N, TRP47H, TYR100H, TYR32H, TYR35H, TYR52H, TYR59H, TYR99H
• N-L: ALA369N, ARG327N, ASN31L, ASN329N, ASN344N, ASN345N, ASP1L, ASP28L, ASP330N, ASP91L, GLN27L, GLN90L, GLY335N, GLY343N, ILE29L, ILE2L, ILE368N, LEU322N, LEU94L, LYS336N, LYS389N, PHE92L, PHE96L, PRO320N, PRO326N, PRO328N, PRO331N, PRO342N, PRO95L, SER298N, SER30L, SER367N, SER370N, THR332N, THR93L, TYR32L, TYR341N, TYR50L, VAL333N
• H-L: ALA93H, ARG100H, ARG94H, ASN33H, ASN34L, ASN39L, ASN53L, ASN60H, ASP100H, ASP101H, ASP1L, ASP41L, ASP91L, CYS88L, CYS92H, GLN105H, GLN37L, GLN38L, GLN39H, GLN43H, GLN61H, GLN6L, GLN89L, GLN90L, GLU46H, GLU57L, GLY100H, GLY100L, GLY101L, GLY104H, GLY106H, GLY42L, GLY44H, GLY49H, GLY96H, GLY99L, HIS55L, ILE48H, ILE48L, ILE50H, LEU33L, LEU45H, LEU46L, LEU47L, LEU94L, LYS38H, LYS45L, LYS62H, PHE100H, PHE63H, PHE87L, PHE92L, PHE96L, PHE98L, PRO95L, SER56L, SER58H, SER95H, THR43L, THR85L, THR93L, THR97L, TRP103H, TRP35L, TRP36H, TRP47H, TYR100H, TYR102H, TYR32L, TYR35H, TYR36L, TYR49L, TYR50L, TYR59H, TYR86L, TYR91H, VAL2H, VAL37H, VAL44L, VAL58L, VAL89H
• A-B: ALA369A, ARG100B, ARG327A, ARG371A, ASN31B, ASN325A, ASN329A, ASN33B, ASN400A, ASN54B, ASP100B, ASP330A, ASP402A, ASP56B, GLU433A, GLY100B, GLY373A, GLY53B, GLY55B, ILE366A, ILE368A, ILE50B, LEU399A, LYS432A, LYS73B, PRO328A, PRO431A, PRO52B, SER367A, SER370A, SER372A, SER404A, SER58B, SER98B, THR30B, THR401A, THR57B, TRP403A, TRP47B, TYR100B, TYR32B, TYR35B, TYR52B, TYR59B, TYR99B
• A-C: ALA369A, ARG327A, ASN31C, ASN329A, ASN344A, ASN345A, ASP1C, ASP28C, ASP330A, ASP91C, GLN27C, GLN90C, GLY335A, GLY343A, ILE29C, ILE2C, ILE368A, LEU322A, LEU94C, LYS336A, LYS389A, PHE92C, PHE96C, PRO320A, PRO326A, PRO328A, PRO331A, PRO342A, PRO95C, SER298A, SER30C, SER367A, SER370A, THR332A, THR93C, TYR32C, TYR341A, TYR50C, VAL333A
• B-C: ALA93B, ARG100B, ARG94B, ASN33B, ASN34C, ASN39C, ASN53C, ASN60B, ASP100B, ASP101B, ASP1C, ASP41C, ASP91C, CYS88C, CYS92B, GLN105B, GLN37C, GLN38C, GLN39B, GLN43B, GLN61B, GLN6C, GLN89C, GLN90C, GLU46B, GLU57C, GLY100B, GLY100C, GLY101C, GLY104B, GLY106B, GLY42C, GLY44B, GLY49B, GLY96B, GLY99C, HIS55C, ILE48B, ILE48C, ILE50B, LEU33C, LEU45B, LEU46C, LEU47C, LEU94C, LYS38B, LYS45C, LYS62B, PHE100B, PHE63B, PHE87C, PHE92C, PHE96C, PHE98C, PRO95C, SER56C, SER58B, SER95B, THR43C, THR85C, THR93C, THR97C, TRP103B, TRP35C, TRP36B, TRP47B, TYR100B, TYR102B, TYR32C, TYR35B, TYR36C, TYR49C, TYR50C, TYR59B, TYR86C, TYR91B, VAL2B, VAL37B, VAL44C, VAL58C, VAL89B