1NIK
wild type rna polymerase ii
Total interactions analyzed 66
Total true interactions 29
Strongest Interaction Chains A-B
Int. Res. 734
Norm. En. per Res. -4.319
Hub Node B(10)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -439.1363 -211.9486 -2519.07 -3170.1549 734 228 61 108051 24 253 230
A-C -34.7065 7.9589 -68.2759 -95.0235 51 16 0 3242 0 15 17
A-D 0.0 0.0 -3.5269 -3.5269 14 0 0 400 0 0 0
A-E -65.3404 -69.3807 -513.223 -647.944 204 49 16 23609 6 81 65
A-F -69.3104 -60.8172 -394.4 -524.5276 165 36 13 18524 1 47 41
A-G 0.0 0.0 -19.589 -19.589 31 3 0 1071 0 0 0
A-H -64.4287 -14.0263 -381.35 -459.8049 141 57 11 17442 1 36 36
A-I -107.6742 -58.7933 -401.688 -568.1556 141 38 11 16825 5 56 47
A-K -50.0263 -33.8056 -277.704 -361.5359 93 18 8 10461 3 23 21
B-C -69.8005 -100.1969 -479.371 -649.3684 170 36 4 18007 8 57 60
B-D 0.0 0.0 -1.9544 -1.9544 11 0 0 204 0 0 0
B-E 0.0 0.0 -0.0003 -0.0003 2 0 0 1 0 0 0
B-F 0.0 0.0 -8.3379 -8.3379 17 1 0 391 0 3 6
B-G 0.0 0.0 -1.8911 -1.8911 13 0 0 254 0 0 0
B-H 0.0 0.0 -0.347 -0.347 2 0 0 41 0 0 0
B-I -11.1111 -55.1192 -284.748 -350.9783 132 31 3 13590 1 44 50
B-J -45.6254 -29.8 -420.869 -496.2944 139 35 7 18961 4 37 37
B-K -11.364 -26.0513 -77.9755 -115.3908 60 7 0 3451 3 16 20
B-L -100.0705 -61.1677 -231.006 -392.2442 108 34 10 11232 9 48 44
C-H -3.2296 -13.6752 -36.3653 -53.2701 24 1 1 1582 1 8 5
C-J -73.5988 -57.3015 -228.961 -359.8612 113 40 11 12476 7 42 29
C-K -35.6583 -24.096 -473.329 -533.0832 151 44 15 22944 5 47 45
C-L -23.9952 -37.9127 -133.614 -195.5219 59 3 9 5333 5 22 15
D-G 0.0 0.0 -6.6876 -6.6876 110 3 0 1467 0 0 0
E-F -14.7332 -18.9002 -24.7371 -58.3705 20 1 0 1142 1 5 7
F-G 0.0 0.0 -5.3654 -5.3654 29 0 0 861 0 0 0
H-K 0.0 0.0 -21.8045 -21.8045 27 0 0 1581 0 5 5
J-L 0.0 0.0 -5.4394 -5.4394 10 0 0 343 0 0 1
K-L 0.0 7.7544 -1.1282 6.6262 5 0 0 187 0 3 2