1NF6
x-ray structure of the desulfovibrio desulfuricans bacterioferritin: the diiron site in different catalytic states ("cycled" structure: reduced in solution and allowed to reoxidise before crystallisation)
Total interactions analyzed 120
Total true interactions 33
Strongest Interaction Chains F-P
Int. Res. 50
Norm. En. per Res. -3.6504
Hub Node B(6)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -67.0284 -33.3507 -384.941 -485.3201 159 20 10 15794 4 48 53
A-N -26.4509 -12.6042 -78.7166 -117.7717 39 7 5 3185 2 13 7
A-O 0.0 23.0387 -25.2599 -2.2212 18 1 0 1018 0 19 22
B-C 0.0 0.0 -1.834 -1.834 9 0 0 162 0 9 4
B-E 0.0 -0.9319 -3.0183 -3.9502 8 0 0 315 0 2 2
B-G -17.5596 -57.1544 -82.4005 -157.1145 46 2 3 3870 12 29 33
B-H -7.881 -7.8774 -84.6317 -100.3901 40 6 5 3309 2 13 7
B-N -10.3062 -55.0515 -79.0327 -144.3903 46 1 3 3839 8 30 31
B-P 0.0 -10.2308 -14.1745 -24.4053 23 1 0 800 1 4 5
C-D -53.3364 -25.3596 -400.117 -478.813 157 16 10 15727 4 48 51
C-E -39.2517 -11.3553 -83.6525 -134.2595 39 8 5 3309 1 14 7
C-G -13.0943 9.0639 -30.6798 -34.7101 20 2 1 1102 0 12 12
C-P 0.0 0.0 -0.3977 -0.3977 4 0 0 83 0 1 2
D-E -17.1606 -63.9826 -74.6657 -155.8089 46 3 3 3517 7 30 30
E-F -49.2715 -21.4866 -378.528 -449.2861 156 25 8 15458 4 49 51
E-H 0.0 15.2059 -4.2205 10.9855 21 0 0 441 0 2 3
E-P -3.0318 -12.6445 -76.2517 -91.928 39 6 4 3115 2 13 7
F-K -15.2471 -59.2128 -75.5001 -149.96 48 0 3 3596 8 30 31
F-L -2.3166 -6.2371 -89.2181 -97.7718 40 4 5 3461 2 14 7
F-P -27.1941 -83.8397 -71.4886 -182.5224 50 3 3 3499 11 30 31
G-H -70.6616 -21.1209 -390.391 -482.1735 160 14 8 15755 4 47 54
G-I -27.2462 -12.1784 -84.7657 -124.1903 41 9 5 3482 1 14 7
G-M -36.1753 -10.5361 -82.5775 -129.2889 38 8 5 3211 1 13 7
G-N -24.569 -54.7197 -81.7484 -161.0371 47 6 3 3885 12 30 33
H-I -21.7801 -61.3412 -77.2183 -160.3396 46 5 3 3667 12 31 32
H-P 0.0 0.0 -0.0266 -0.0266 4 0 0 14 0 2 1
I-J -61.0969 -24.7055 -383.691 -469.4934 157 17 8 15630 5 48 52
I-M 0.0 0.0 -0.1174 -0.1174 4 0 0 44 0 0 1
K-L -63.5062 -26.4256 -382.71 -472.6418 157 15 10 15422 4 48 53
K-O -25.8231 -9.8228 -79.5683 -115.2142 40 8 5 3301 1 14 7
K-P -8.2101 -66.746 -82.0642 -157.0202 48 3 3 3900 12 32 32
M-N -60.2906 -19.1575 -384.25 -463.6981 159 13 9 15703 4 48 52
O-P -44.9515 -27.185 -382.714 -454.8505 158 13 10 15439 4 46 53