1N5Y

hiv-1 reverse transcriptase crosslinked to post- translocation aztmp-terminated dna (complex p)

• Total interactions analyzed: 15
• Total true interactions: 4
• Strongest Interaction:
  • Chains: B-H
  • Int. Res.: 47
  • Norm. En. per Res.: -3.8401
• Hub Node: B(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-92.0496	-28.0234	-687.705	-807.778	256	61	6	30075	1	56	52
B-L	-7.2208	-2.8586	-49.2541	-59.3335	20	6	0	1845	0	2	3
B-H	-13.2641	-36.4274	-130.792	-180.4835	47	5	2	5257	2	17	12
L-H	-9.5398	-19.9254	-458.397	-487.8622	186	31	9	18757	2	13	10

Interface residues

• A-B: ALA129B, ALA158A, ALA288B, ALA360B, ALA408A, ALA437A, ALA508A, ALA534A, ALA538A, ALA98A, ARG143B, ARG277B, ARG284B, ARG356A, ARG356B, ARG358A, ARG463A, ASN136B, ASN137B, ASN255B, ASN265B, ASN363B, ASN418B, ASN460A, ASN494A, ASN545A, ASN54B, ASN57B, ASP121A, ASP17B, ASP256B, ASP364B, ASP86A, GLN161A, GLN182A, GLN23B, GLN258B, GLN269B, GLN330B, GLN332B, GLN334B, GLN367B, GLN373A, GLN394B, GLN407A, GLN464A, GLN500A, GLN507A, GLN547A, GLN85A, GLN91A, GLU138B, GLU169A, GLU28B, GLU291B, GLU29B, GLU370A, GLU378A, GLU396B, GLU399A, GLU399B, GLU404A, GLU404B, GLU413A, GLU42B, GLU432A, GLU438A, GLU53B, GLU546A, GLU89A, GLY141B, GLY155A, GLY262B, GLY285B, GLY333B, GLY335B, GLY359A, GLY384A, GLY436A, GLY462A, GLY504A, GLY51B, GLY541A, GLY543A, GLY544A, GLY93A, GLY99A, HIS361B, HIS539A, HIS96A, ILE132B, ILE135B, ILE142B, ILE159A, ILE178A, ILE180A, ILE257B, ILE31B, ILE329B, ILE375A, ILE380A, ILE382A, ILE393B, ILE411A, ILE434A, ILE495A, ILE505A, ILE506A, ILE50B, ILE542A, ILE94A, LEU100A, LEU168A, LEU260B, LEU264B, LEU26B, LEU279B, LEU282B, LEU283B, LEU289B, LEU368B, LEU391B, LEU422B, LEU503A, LEU533A, LEU92A, LYS101A, LYS11A, LYS126B, LYS154A, LYS166A, LYS172A, LYS173A, LYS20B, LYS22B, LYS249B, LYS259B, LYS263B, LYS281B, LYS287B, LYS30B, LYS331B, LYS366A, LYS366B, LYS374A, LYS385A, LYS395B, LYS424B, LYS431A, LYS43B, LYS461A, LYS49B, LYS540A, MET164A, MET184A, MET230A, PHE130B, PHE160A, PHE389A, PHE416B, PHE440A, PHE87A, PRO133B, PRO140B, PRO14A, PRO157A, PRO19B, PRO25B, PRO321A, PRO387A, PRO392B, PRO412A, PRO420B, PRO421B, PRO433A, PRO52B, PRO537A, PRO55B, PRO59B, PRO95A, PRO97A, PRO9A, SER134B, SER156A, SER162A, SER163A, SER280B, SER379A, THR131B, THR139B, THR165A, THR253B, THR27B, THR286B, THR290B, THR362B, THR369A, THR369B, THR376A, THR377A, THR386A, THR397B, THR39B, THR400B, THR403A, THR403B, THR409A, THR419B, THR439A, THR459A, THR497A, THR58B, TRP229A, TRP24B, TRP266B, TRP337B, TRP383A, TRP398A, TRP398B, TRP401A, TRP401B, TRP402A, TRP406A, TRP410A, TRP535A, TRP88A, TYR144B, TYR181A, TYR183A, TYR188A, TYR319A, TYR405A, TYR405B, TYR441A, TYR501A, TYR532A, TYR56B, VAL10A, VAL179A, VAL21B, VAL254B, VAL261B, VAL276B, VAL365B, VAL372A, VAL381A, VAL417B, VAL423B, VAL435A, VAL458A, VAL493A, VAL496A, VAL536A, VAL548A, VAL8A, VAL90A
• B-L: ARG358B, GLN222B, GLN90L, GLU224B, ILE29L, ILE2L, LYS223B, LYS93L, PHE227B, PHE94L, PRO225B, PRO226B, PRO95L, SER30L, SER31L, SER92L, TRP96L, TYR32L, TYR50L, TYR91L
• B-H: ALA101H, ALA109H, ARG199B, ARG358B, ARG60H, ASN59H, ASP107H, ASP56H, ASP57H, ASP58H, GLN197B, GLN222B, GLU194B, GLU203B, GLU224B, GLU233B, GLY196B, GLY231B, GLY33H, GLY35H, HIS198B, HIS221B, HIS235B, ILE102H, ILE195B, ILE34H, LEU228B, LYS220B, LYS223B, MET230B, PHE227B, PRO225B, PRO226B, SER104H, SER108H, SER30H, SER32H, THR103H, THR106H, THR200B, THR31H, THR52H, TRP229B, TRP54H, TRP55H, TYR232B, VAL105H
• L-H: ALA101H, ALA109H, ALA130L, ALA135H, ALA139H, ALA178H, ALA223H, ALA51H, ALA98H, ARG211L, ARG40H, ARG60H, ASN137L, ASN138L, ASN161L, ASN210L, ASN34L, ASN59H, ASN62H, ASP107H, ASP111H, ASP165L, ASP167L, ASP170L, ASP1L, ASP224H, ASP58H, CYS134L, CYS150H, CYS225H, CYS88L, GLN115H, GLN124L, GLN181H, GLN37L, GLN38L, GLN41H, GLN89L, GLN90L, GLN99H, GLU123L, GLU41L, GLU48H, GLY100L, GLY101L, GLY114H, GLY116H, GLY128L, GLY129L, GLY137H, GLY149H, GLY158L, GLY172H, GLY35H, GLY42L, GLY44H, GLY46H, GLY99L, HIS112H, HIS174H, HIS55L, ILE102H, ILE117L, ILE220H, ILE39H, ILE48L, ILE53H, ILE94H, LEU125L, LEU134H, LEU136L, LEU148H, LEU151H, LEU160L, LEU180H, LEU184H, LEU187H, LEU33L, LEU46L, LEU47H, LEU50H, LEU65H, LYS103L, LYS153H, LYS169L, LYS207L, LYS218H, LYS219H, LYS45H, LYS45L, LYS93L, MET110H, MET145H, MET175L, PHE118L, PHE135L, PHE139L, PHE176H, PHE209L, PHE94L, PHE98L, PRO119L, PRO120L, PRO133H, PRO136H, PRO177H, PRO63H, PRO95L, SER100H, SER104H, SER108H, SER116L, SER121L, SER122L, SER127L, SER130H, SER131L, SER138H, SER162L, SER170H, SER171H, SER174L, SER176L, SER177L, SER182H, SER188H, SER189H, SER190H, SER208L, SER30L, SER31L, SER53L, SER56L, SER64H, THR103H, THR106H, THR114L, THR126L, THR147H, THR164L, THR172L, THR175H, THR178L, THR180L, THR186H, THR192H, THR37H, THR43L, THR51L, THR52H, THR85L, THR97L, TRP113H, TRP163L, TRP164H, TRP198H, TRP35L, TRP38H, TRP49H, TRP54H, TRP96L, TYR132H, TYR173L, TYR32L, TYR36L, TYR49L, TYR50L, TYR61H, TYR86L, TYR87L, TYR91L, TYR96H, VAL105H, VAL115L, VAL131H, VAL132L, VAL133L, VAL146H, VAL152H, VAL159L, VAL173H, VAL179H, VAL191H, VAL221H, VAL36H, VAL44L