1N13
the crystal structure of pyruvoyl-dependent arginine decarboxylase from methanococcus jannashii
Total interactions analyzed 66
Total true interactions 33
Strongest Interaction Chains K-L
Int. Res. 118
Norm. En. per Res. -7.8024
Hub Node B(7)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -276.7155 -16.4323 -609.644 -902.7917 117 32 40 21960 1 8 7
A-C -28.0306 13.2907 -91.0908 -105.8307 33 5 6 2965 0 0 4
A-D 0.0 0.0 -28.6527 -28.6527 21 0 1 1370 0 0 0
A-E -27.4064 2.5502 -61.7633 -86.6195 33 5 4 2616 0 0 5
A-F -32.6134 -22.3816 -133.106 -188.101 59 3 1 4871 4 8 6
B-C -37.2043 -21.5931 -137.141 -195.9384 60 5 1 4963 4 9 6
B-D 0.0 0.0 -43.6772 -43.6772 24 1 0 1668 0 0 0
B-E 0.0 0.0 -60.3076 -60.3076 31 1 5 2610 0 0 0
B-F 0.0 0.0 -43.5359 -43.5359 26 1 0 1641 0 0 0
B-G -8.1876 0.0 -28.1309 -36.3185 33 0 0 1430 0 1 1
B-H -16.5544 -2.7199 -55.6483 -74.9226 40 1 0 2682 2 16 21
B-J 0.0 0.0 -8.2482 -8.2482 16 0 0 363 0 4 0
C-D -270.0439 -4.833 -603.454 -878.3309 119 34 45 21383 1 7 8
C-E -39.093 -0.0364 -111.022 -150.1514 37 6 6 4205 0 2 5
C-F 0.0 0.0 -22.6794 -22.6794 21 3 2 1097 0 0 0
D-E -21.0058 -28.4451 -157.802 -207.2529 73 5 2 6017 4 9 8
D-F 0.0 0.0 -41.3397 -41.3397 24 0 0 1602 0 0 0
E-F -278.1235 -13.85 -633.349 -925.3224 127 32 42 23468 1 8 7
G-H -265.3008 -0.8156 -612.564 -878.6805 115 33 41 21975 1 8 7
G-I -26.49 1.4216 -57.4394 -82.5078 30 6 4 2481 0 0 3
G-J -32.3085 -26.316 -135.238 -193.8625 59 4 1 4887 4 9 6
G-K -20.9939 2.7495 -55.9365 -74.1809 23 4 5 2219 0 0 1
G-L 0.0 0.0 -25.7076 -25.7076 21 1 1 1350 0 0 0
H-I 0.0 0.0 -60.8488 -60.8488 31 4 5 2543 0 0 0
H-J 0.0 0.0 -41.9186 -41.9186 26 0 0 1627 0 0 0
H-K -24.32 -23.7033 -138.465 -186.4883 61 6 1 5044 4 9 6
H-L 0.0 0.0 -44.2291 -44.2291 24 0 0 1680 0 0 0
I-J -264.3662 -11.7696 -631.404 -907.5398 123 34 40 23403 1 9 7
I-K -40.8609 -0.2878 -111.233 -152.3817 34 8 6 4074 0 1 3
I-L -33.3833 -18.1505 -156.412 -207.9458 70 4 2 6002 4 9 8
J-K 0.0 0.0 -24.4213 -24.4213 21 1 2 1139 0 0 0
J-L 0.0 0.0 -41.4567 -41.4567 24 0 0 1611 0 0 0
K-L -276.6759 -12.5587 -631.45 -920.6846 118 36 42 22765 1 8 7