1MZ8

crystal structures of the nuclease domain of cole7/im7 in complex with a phosphate ion and a zinc ion

• Total interactions analyzed: 6
• Total true interactions: 6
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 75
  • Norm. En. per Res.: -5.7751
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-94.3763	-108.3159	-230.442	-433.1342	75	12	1	8234	7	52	16
A-C	-19.7683	-21.664	-82.5974	-124.0297	42	3	2	4061	4	18	22
A-D	-16.2722	-1.6866	-53.0749	-71.0338	42	2	2	2841	2	38	33
B-C	-22.0576	0.5792	-47.7404	-69.2188	41	3	2	2713	2	38	33
B-D	0.0	38.021	-0.9627	37.0583	8	15	0	338	0	2	2
C-D	-87.5399	-117.6928	-226.954	-432.1867	77	14	1	8225	7	52	16

Interface residues

• A-B: ALA28A, ALA29A, ALA526B, ARG496B, ARG515B, ARG520B, ARG530B, ARG538B, ARG61A, ASN26A, ASN516B, ASN517B, ASN518B, ASP31A, ASP32A, ASP35A, ASP49A, ASP519B, ASP52A, ASP533B, ASP59A, ASP62A, ASP63A, GLN512B, GLN532B, GLU21A, GLU23A, GLU25A, GLU39A, GLU66A, GLY50A, GLY524B, GLY67A, HIS47A, ILE22A, ILE54A, ILE68A, LEU19A, LEU34A, LEU38A, LEU465B, LEU53A, LYS20A, LYS24A, LYS463B, LYS497B, LYS522B, LYS525B, LYS528B, LYS537B, MET521B, PHE513B, PHE541B, PRO48A, PRO527B, PRO57A, PRO65A, SER514B, SER540B, SER58A, SER64A, THR30A, THR51A, THR529B, THR531B, THR539B, THR565B, TYR55A, TYR56A, VAL27A, VAL33A, VAL36A, VAL42A, VAL523B, VAL534B
• A-C: ALA13A, ALA13C, ALA28A, ALA28C, ALA29A, ALA29C, ASN26A, ASN26C, GLN17A, GLN17C, GLU14A, GLU14C, GLU21A, GLU21C, GLU23A, GLU23C, GLU25A, GLU25C, GLU66A, GLU66C, ILE22A, ILE22C, LEU18A, LEU18C, LEU19A, LEU19C, LYS20A, LYS20C, LYS24A, LYS24C, MET1A, MET1C, PHE15A, PHE15C, PRO65A, PRO65C, THR30A, THR30C, VAL16A, VAL16C, VAL27A, VAL27C
• A-D: ALA13A, ARG515D, ARG520D, ASN516D, ASN517D, ASN518D, ASP519D, ASP62A, ASP63A, GLN17A, GLN86A, GLU12A, GLU14A, GLU23A, GLU501D, GLU66A, GLY524D, GLY67A, GLY87A, ILE68A, LEU19A, LYS20A, LYS490D, LYS498D, LYS505D, LYS511D, LYS522D, LYS525D, LYS70A, LYS73A, MET521D, PHE15A, PHE84A, PRO507D, PRO65A, SER504D, SER510D, SER64A, THR11A, VAL16A, VAL523D, VAL69A
• B-C: ALA13C, ARG515B, ARG520B, ASN516B, ASN517B, ASN518B, ASP519B, ASP62C, ASP63C, GLN17C, GLN86C, GLU12C, GLU14C, GLU23C, GLU501B, GLU66C, GLY524B, GLY67C, GLY87C, LEU19C, LYS20C, LYS490B, LYS498B, LYS505B, LYS511B, LYS522B, LYS525B, LYS70C, LYS73C, MET521B, PHE15C, PHE84C, PRO507B, PRO65C, SER504B, SER510B, SER64C, THR11C, VAL16C, VAL523B, VAL69C
• B-D: ARG515B, ARG515D, ASN516B, ASN516D, ASN518B, ASN518D, SER514B, SER514D
• C-D: ALA28C, ALA29C, ALA468D, ALA526D, ARG496D, ARG515D, ARG520D, ARG530D, ARG538D, ARG61C, ASN26C, ASN466D, ASN516D, ASN517D, ASN518D, ASP31C, ASP32C, ASP35C, ASP49C, ASP519D, ASP52C, ASP533D, ASP59C, ASP62C, ASP63C, GLN512D, GLN532D, GLU21C, GLU23C, GLU25C, GLU39C, GLU66C, GLY50C, GLY524D, GLY67C, HIS47C, ILE22C, ILE54C, ILE68C, LEU19C, LEU34C, LEU38C, LEU465D, LEU53C, LYS20C, LYS24C, LYS463D, LYS497D, LYS522D, LYS525D, LYS528D, LYS537D, MET521D, PHE513D, PHE541D, PRO48C, PRO527D, PRO57C, PRO65C, SER514D, SER540D, SER58C, SER64C, THR30C, THR51C, THR529D, THR531D, THR539D, THR565D, TYR55C, TYR56C, VAL27C, VAL33C, VAL36C, VAL42C, VAL523D, VAL534D