1MNM

yeast matalpha2/mcm1/dna ternary transcription complex crystal structure

• Total interactions analyzed: 15
• Total true interactions: 4
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 148
  • Norm. En. per Res.: -4.7109
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-114.7311	-36.6258	-545.852	-697.209	148	17	28	24026	4	28	22
A-C	0.0	0.0	-0.0024	-0.0024	4	0	0	6	0	1	1
A-D	-10.6145	12.4876	-64.3476	-62.4745	23	7	0	2368	1	11	21
B-C	-59.1421	0.0	-188.045	-247.1871	75	7	7	7662	0	4	12

Interface residues

• A-B: ALA47A, ALA47B, ALA92A, ALA92B, ALA96A, ALA96B, ARG31A, ARG31B, ARG32A, ARG32B, ARG39A, ARG39B, ARG87A, ARG87B, ASN88A, ASN88B, ASN95A, ASN95B, ASP98A, ASP98B, ASP99A, CYS93A, CYS93B, GLN57A, GLN57B, GLN83A, GLN83B, GLN84A, GLN84B, GLN91A, GLN91B, GLU22A, GLU22B, GLU27A, GLU27B, GLU49A, GLU49B, GLU65A, GLU65B, GLU78A, GLU78B, GLU85A, GLU85B, GLY42A, GLY42B, GLY55A, GLY55B, GLY67A, GLY67B, GLY86A, GLY86B, HIS33A, HIS33B, HIS41A, HIS41B, ILE21A, ILE21B, ILE23A, ILE23B, ILE26A, ILE26B, ILE43A, ILE43B, ILE80A, ILE80B, ILE90A, ILE90B, LEU50A, LEU50B, LEU53A, LEU53B, LEU59A, LEU59B, LEU60A, LEU60B, LEU61A, LEU61B, LEU68A, LEU68B, LEU89A, LEU89B, LEU94A, LEU94B, LYS24A, LYS24B, LYS38A, LYS38B, LYS40A, LYS40B, LYS45A, LYS45B, LYS46A, LYS46B, LYS76A, LYS76B, MET44A, MET44B, PHE25A, PHE25B, PHE36A, PHE36B, PHE48A, PHE48B, PHE72A, PHE72B, PHE77A, PHE77B, PRO75A, PRO75B, PRO79A, PRO79B, PRO97A, PRO97B, SER37A, SER37B, SER51A, SER51B, SER64A, SER64B, SER73A, THR35A, THR35B, THR54A, THR54B, THR56A, THR56B, THR66A, THR66B, THR71A, THR71B, THR74A, THR74B, TYR70A, TYR70B, VAL34A, VAL34B, VAL52A, VAL52B, VAL58A, VAL58B, VAL62A, VAL62B, VAL63A, VAL63B, VAL69A, VAL69B, VAL81A, VAL81B
• A-C: GLN121C, LEU114C, PHE25A, PHE77A
• A-D: ARG135D, ARG183D, ARG184D, ARG185D, ARG18A, ARG19A, ARG31A, ARG32A, ASN182D, ASN28A, GLU17A, GLU187D, GLU27A, HIS33A, ILE26A, LYS186D, LYS188D, LYS29A, PHE25A, THR189D, THR30A, TYR131D, VAL34A
• B-C: ALA47B, ALA92B, ARG132C, ARG135C, ARG87B, ASN117C, ASN125C, ASN88B, ASN95B, ASP122C, GLN121C, GLN57B, GLN83B, GLN84B, GLN91B, GLU49B, GLU78B, GLY113C, GLY133C, GLY55B, GLY67B, GLY86B, HIS134C, HIS41B, ILE124C, ILE80B, ILE90B, LEU114C, LEU50B, LEU53B, LEU59B, LEU60B, LEU61B, LEU68B, LEU89B, LEU94B, LYS126C, LYS129C, LYS40B, LYS45B, LYS46B, LYS76B, MET123C, MET44B, PHE116C, PHE36B, PHE48B, PHE72B, PHE77B, PRO130C, PRO75B, SER127C, SER37B, SER51B, SER64B, SER73B, THR120C, THR128C, THR54B, THR56B, THR66B, THR71B, THR74B, THR82B, TYR131C, TYR70B, VAL115C, VAL118C, VAL119C, VAL52B, VAL58B, VAL62B, VAL63B, VAL69B, VAL81B