1MLC

monoclonal antibody fab d44.1 raised against chicken egg- white lysozyme complexed with lysozyme

• Total interactions analyzed: 15
• Total true interactions: 8
• Strongest Interaction:
  • Chains: D-F
  • Int. Res.: 55
  • Norm. En. per Res.: -4.498
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-46.635	-36.351	-472.072	-555.0581	187	18	7	18266	0	27	22
A-E	-14.5829	0.0	-78.4616	-93.0445	34	7	0	2903	0	3	4
A-F	-5.9075	-0.9892	-42.3856	-49.2823	37	3	1	2068	0	11	10
B-D	0.0	0.0	-54.6655	-54.6655	36	0	0	2377	0	1	2
B-E	-18.6078	-86.4033	-121.252	-226.2631	54	5	0	5058	5	7	6
C-D	-19.848	-36.762	-461.57	-518.18	187	24	8	18199	0	26	22
C-F	0.0	0.0	-72.4339	-72.4339	34	4	0	2873	0	3	4
D-F	-29.2253	-87.899	-130.267	-247.3914	55	9	0	5047	4	7	6

Interface residues

• A-B: ALA128B, ALA130A, ALA132B, ALA133B, ALA171B, ALA97B, ARG191B, ARG211A, ARG216B, ARG45A, ARG96A, ASN102B, ASN137A, ASN138A, ASN161A, ASN32A, ASN61B, ASN92A, ASP100B, ASP165A, ASP167A, ASP170A, ASP1A, ASP1A5, ASP217B, CB8.9717031.55252, CB9.29619-2.09628, CYS134A, CYS143B, CYS214A, CYS218B, CYS88A, CYS96B, GLN108B, GLN124A, GLN174B, GLN38A, GLN39B, GLN53A, GLN6A, GLN89A, GLN90A, GLU123A, GLU213A, GLU35B, GLU42A, GLU46B, GLU50B, GLU62B, GLU6B, GLY100A, GLY101A, GLY101B, GLY104B, GLY107B, GLY109B, GLY129A, GLY130B, GLY142B, GLY147B, GLY158A, GLY165B, GLY42B, GLY44B, GLY49B, GLY99A, GLY99B, HIS167B, HIS34A, HIS41A, HIS43B, ILE117A, ILE213B, ILE48A, ILE48B, LEU125A, LEU127B, LEU136A, LEU141B, LEU144B, LEU160A, LEU173B, LEU177B, LEU179A, LEU180B, LEU181A, LEU33A, LEU45B, LEU46A, LEU47A, LYS146B, LYS169A, LYS207A, LYS211B, LYS212B, LYS38B, LYS39A, LYS49A, LYS63B, MET138B, MET175A, MET85A, PHE118A, PHE125B, PHE135A, PHE139A, PHE169B, PHE209A, PHE64B, PHE87A, PHE98A, PRO119A, PRO120A, PRO126B, PRO129B, PRO170B, PRO44A, PRO95A, SER116A, SER121A, SER122A, SER123B, SER127A, SER131A, SER131B, SER162A, SER164B, SER174A, SER175B, SER176A, SER177A, SER181B, SER182B, SER183B, SER208A, SER40A, SER43A, SER55A, SER91A, SER93A, THR110B, THR111B, THR114A, THR126A, THR140B, THR164A, THR168B, THR172A, THR178A, THR179B, THR180A, THR185B, THR97A, TRP106B, TRP157B, TRP163A, TRP33B, TRP35A, TRP36B, TRP47B, TRP94A, TYR103B, TYR105B, TYR173A, TYR178B, TYR186A, TYR36A, TYR50A, TYR59B, TYR60B, TYR86A, TYR94B, TYR95B, VAL115A, VAL124B, VAL132A, VAL133A, VAL139B, VAL145B, VAL159A, VAL166B, VAL172B, VAL184B, VAL214B, VAL37B, VAL51A, VAL93B
• A-E: ARG45E, ARG61E, ARG68E, ARG96A, ASN31A, ASN32A, ASN44E, ASN46E, ASN92A, ASP48E, ASP66E, GLN27A, GLN53A, GLN90A, GLY49E, GLY67E, GLY71E, HIS34A, ILE29A, ILE2A, PRO70E, PRO95A, SER28A, SER30A, SER50E, SER60E, SER91A, SER93A, THR47E, THR51E, THR69E, TRP94A, TYR50A, TYR53E
• A-F: ALA109A, ALA10F, ALA9F, ARG108A, ARG128F, ARG14F, ARG5F, ARG61A, ASN37F, ASN76A, ASP17A, CYS127F, CYS6F, GLU79A, GLU7F, GLY126F, GLY16A, GLY4F, ILE75A, LEU129F, LEU73A, LEU8F, LYS1F, PHE38F, PHE3F, PRO15A, SER18A, SER20A, SER63A, SER74A, SER77A, THR14A, THR72A, THR80A, VAL19A, VAL2F, VAL78A
• B-D: ALA133B, ALA16D, ALA68D, ARG191B, ASN136B, GLN134B, GLN82D, GLU194B, GLY15D, GLY66D, ILE20D, LEU83D, LEU86D, LYS19D, LYS67D, MET12D, MET138B, MET81D, PRO14D, PRO187B, PRO190B, PRO192B, SER137B, SER17D, SER188B, SER189B, SER193B, SER84D, SER85D, THR135B, THR69D, THR71D, TYR80D, VAL139B, VAL186B, VAL18D
• B-E: ALA42E, ALA82E, ARG45E, ARG68E, ARG98B, ASN102B, ASN44E, ASN65E, ASP100B, ASP52E, ASP66E, CYS80E, GLN41E, GLU35B, GLU50B, GLY101B, GLY49B, GLY49E, GLY54B, GLY54E, GLY56B, GLY67E, GLY99B, ILE34B, ILE51B, ILE78E, LEU52B, LEU83E, LEU84E, LYS1E, PRO53B, PRO70E, PRO79E, SER30B, SER55B, SER57B, SER60E, SER81E, SER85E, SER86E, THR28B, THR31B, THR40E, THR43E, THR51E, THR58B, THR69E, TRP33B, TRP47B, TYR103B, TYR32B, TYR53E, TYR59B, TYR60B
• C-D: ALA128D, ALA130C, ALA132D, ALA133D, ALA171D, ALA97D, ARG191D, ARG211C, ARG216D, ARG40D, ARG45C, ARG96C, ARG98D, ASN102D, ASN136D, ASN137C, ASN138C, ASN161C, ASN210C, ASN212C, ASN32C, ASN61D, ASN92C, ASP100D, ASP165C, ASP167C, ASP170C, ASP1C, ASP217D, CYS134C, CYS143D, CYS214C, CYS218D, CYS88C, CYS96D, GLN108D, GLN124C, GLN174D, GLN38C, GLN39D, GLN53C, GLN6C, GLN89C, GLN90C, GLU123C, GLU151D, GLU213C, GLU35D, GLU42C, GLU46D, GLU50D, GLU62D, GLU6D, GLY100C, GLY101C, GLY101D, GLY104D, GLY107D, GLY109D, GLY129C, GLY130D, GLY142D, GLY158C, GLY165D, GLY42D, GLY44D, GLY49D, GLY99C, GLY99D, HIS167D, HIS34C, HIS41C, HIS43D, ILE117C, ILE213D, ILE48C, ILE48D, LEU125C, LEU127D, LEU136C, LEU141D, LEU144D, LEU160C, LEU173D, LEU177D, LEU179C, LEU180D, LEU181C, LEU33C, LEU45D, LEU46C, LEU47C, LYS146D, LYS169C, LYS207C, LYS211D, LYS212D, LYS38D, LYS39C, LYS49C, LYS63D, MET138D, MET175C, MET85C, PHE118C, PHE125D, PHE135C, PHE139C, PHE169D, PHE209C, PHE64D, PHE87C, PHE98C, PRO119C, PRO120C, PRO126D, PRO129D, PRO170D, PRO41D, PRO44C, PRO95C, SER116C, SER121C, SER122C, SER123D, SER127C, SER131C, SER131D, SER162C, SER163D, SER164D, SER174C, SER175D, SER176C, SER177C, SER181D, SER182D, SER183D, SER208C, SER40C, SER43C, SER55C, SER91C, SER93C, THR114C, THR126C, THR140D, THR164C, THR168D, THR172C, THR178C, THR179D, THR180C, THR185D, THR97C, TRP106D, TRP157D, TRP163C, TRP33D, TRP35C, TRP36D, TRP47D, TRP94C, TYR103D, TYR105D, TYR173C, TYR36C, TYR50C, TYR59D, TYR60D, TYR86C, TYR94D, TYR95D, VAL115C, VAL124D, VAL132C, VAL133C, VAL139D, VAL145D, VAL159C, VAL166D, VAL172D, VAL184D, VAL214D, VAL37D, VAL51C, VAL93D
• C-F: ARG45F, ARG61F, ARG68F, ARG96C, ASN31C, ASN32C, ASN44F, ASN46F, ASN92C, ASP48F, ASP66F, GLN27C, GLN53C, GLN90C, GLY49F, GLY67F, GLY71F, HIS34C, ILE29C, ILE2C, PRO70F, PRO95C, SER28C, SER30C, SER50F, SER60F, SER91C, SER93C, THR47F, THR51F, THR69F, TRP94C, TYR50C, TYR53F
• D-F: ALA42F, ALA82F, ARG45F, ARG68F, ARG98D, ASN102D, ASN44F, ASN65F, ASP100D, ASP52F, ASP66F, CYS64F, CYS80F, GLN41F, GLU35D, GLU50D, GLY101D, GLY49D, GLY49F, GLY54D, GLY54F, GLY56D, GLY67F, GLY99D, ILE34D, ILE51D, ILE78F, LEU52D, LEU83F, LEU84F, PHE29D, PHE70D, PRO53D, PRO70F, PRO79F, SER30D, SER55D, SER57D, SER60F, SER81F, SER85F, THR28D, THR31D, THR40F, THR43F, THR51F, THR58D, THR69F, TRP33D, TRP47D, TYR103D, TYR32D, TYR53F, TYR59D, TYR60D