1MGQ

crystal structure of a heptameric sm-like protein from methanobacterium thermoautotrophicum

• Total interactions analyzed: 21
• Total true interactions: 7
• Strongest Interaction:
  • Chains: A-G
  • Int. Res.: 81
  • Norm. En. per Res.: -4.2587
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-73.4163	0.9275	-240.718	-313.2067	82	22	10	10872	6	29	27
A-G	-75.552	-28.6091	-240.793	-344.954	81	24	11	10351	6	27	27
B-C	-65.402	-11.519	-259.511	-336.4319	85	16	10	10972	5	32	30
C-D	-64.3337	17.3036	-260.012	-307.0421	81	12	10	10487	4	29	27
D-E	-32.2877	-29.4086	-230.087	-291.7833	77	6	11	9712	3	27	25
E-F	-44.7634	-20.8622	-242.709	-308.3346	80	7	11	10226	6	27	28
F-G	-48.8857	-14.0843	-218.304	-281.274	75	11	7	9064	5	29	26

Interface residues

• A-B: ALA17A, ALA54B, ARG13A, ARG34A, ARG34B, ARG37A, ARG64B, ARG65B, ARG72A, ARG72B, ARG8A, ARG8A5, ASN10A, ASN20A, ASN23B, ASN48A, ASN48B, ASN52B, ASN75A, ASN75B, ASP16A, ASP33A, ASP44A, ASP44B, ASP74A, ASP74B, CB7.657971.84538, GLN12A, GLU35A, GLU56B, GLY19A, GLY19B, GLY32A, GLY32B, GLY60A, GLY67B, GLY73A, GLY73B, HIS46A, HIS46B, ILE27A, ILE28A, ILE71B, ILE76A, ILE76B, ILE79A, LEU15A, LEU18A, LEU22B, LEU30A, LEU30B, LEU40B, LEU45A, LEU45B, LEU49A, LEU49B, LEU51B, LEU57A, LEU66B, LEU70B, LYS29A, LYS31A, LYS31B, LYS41B, MET47A, MET47B, PHE36A, PHE36B, PHE43A, PHE43B, PRO14A, PRO81A, SER21A, SER42B, SER80A, THR68B, TYR78A, VAL11A, VAL50B, VAL69B, VAL77A, VAL9A
• A-G: ALA17G, ALA54A, ARG13G, ARG34A, ARG34G, ARG37G, ARG64A, ARG65A, ARG72A, ARG72G, ASN10G, ASN20G, ASN23A, ASN48A, ASN48G, ASN52A, ASN75A, ASN75G, ASP16G, ASP33G, ASP44A, ASP44G, ASP74A, ASP74G, GLN12G, GLU35G, GLU56A, GLY19A, GLY19G, GLY32A, GLY32G, GLY60G, GLY67A, GLY73A, GLY73G, HIS46A, HIS46G, ILE27G, ILE28G, ILE71A, ILE76A, ILE76G, ILE79G, LEU15G, LEU18G, LEU22A, LEU30A, LEU30G, LEU40A, LEU40G, LEU45A, LEU45G, LEU49A, LEU49G, LEU51A, LEU57G, LEU66A, LEU70A, LYS29G, LYS31A, LYS31G, LYS41A, MET47A, MET47G, PHE36A, PHE36G, PHE43A, PHE43G, PRO14G, PRO81G, SER21G, SER42A, SER80G, THR68A, TYR78G, VAL11G, VAL26G, VAL50A, VAL69A, VAL77G, VAL9G
• B-C: ALA17B, ALA54C, ARG13B, ARG13C, ARG34B, ARG34C, ARG37B, ARG64C, ARG65C, ARG72B, ARG72C, ARG8B, ASN10B, ASN20B, ASN23C, ASN48B, ASN48C, ASN52C, ASN75B, ASN75C, ASP16B, ASP16C, ASP33B, ASP44C, ASP74B, ASP74C, GLN12B, GLU35B, GLU56C, GLU58C, GLY19B, GLY19C, GLY32B, GLY60B, GLY67C, GLY73B, GLY73C, HIS46B, HIS46C, ILE27B, ILE28B, ILE71C, ILE76B, ILE76C, ILE79B, LEU15B, LEU18B, LEU18C, LEU22C, LEU30B, LEU30C, LEU40B, LEU40C, LEU45B, LEU45C, LEU49B, LEU49C, LEU51C, LEU57B, LEU57C, LEU66C, LEU70C, LYS29B, LYS31B, LYS31C, LYS41C, MET47B, MET47C, PHE36B, PHE36C, PHE43B, PHE43C, PRO14B, PRO81B, SER21B, SER42C, SER80B, THR63C, THR68C, TYR78B, VAL11B, VAL50C, VAL69C, VAL77B, VAL9B
• C-D: ALA17C, ALA54D, ARG13C, ARG34C, ARG34D, ARG37C, ARG64D, ARG65D, ARG72C, ARG72D, ARG8C, ASN10C, ASN20C, ASN23D, ASN48C, ASN48D, ASN52D, ASN75C, ASN75D, ASP16C, ASP33C, ASP44D, ASP74C, ASP74D, GLN12C, GLU35C, GLU56D, GLY19C, GLY19D, GLY32C, GLY32D, GLY60C, GLY67D, GLY73C, GLY73D, HIS46C, HIS46D, ILE27C, ILE28C, ILE71D, ILE76C, ILE76D, ILE79C, LEU15C, LEU18C, LEU22D, LEU30C, LEU30D, LEU40C, LEU40D, LEU45C, LEU45D, LEU49C, LEU49D, LEU51D, LEU57C, LEU66D, LEU70D, LYS29C, LYS31C, LYS31D, LYS41D, MET47C, MET47D, PHE36C, PHE36D, PHE43C, PHE43D, PRO14C, PRO81C, SER21C, SER42D, SER80C, THR68D, TYR78C, VAL11C, VAL26C, VAL50D, VAL69D, VAL77C, VAL9C
• D-E: ALA17D, ALA54E, ARG13D, ARG34D, ARG34E, ARG37D, ARG64E, ARG65E, ARG72D, ARG72E, ASN10D, ASN20D, ASN23E, ASN48D, ASN48E, ASN52E, ASN75D, ASN75E, ASP16D, ASP33D, ASP44E, ASP59D, ASP74D, ASP74E, GLN12D, GLU35D, GLU56E, GLY19D, GLY19E, GLY32D, GLY32E, GLY60D, GLY67E, GLY73D, GLY73E, HIS46D, HIS46E, ILE27D, ILE28D, ILE71E, ILE76D, ILE76E, ILE79D, LEU15D, LEU18D, LEU22E, LEU30D, LEU30E, LEU40E, LEU45D, LEU45E, LEU49D, LEU49E, LEU51E, LEU66E, LEU70E, LYS29D, LYS31D, LYS31E, LYS41E, MET47D, MET47E, PHE36E, PHE43D, PHE43E, PRO14D, PRO81D, SER21D, SER42E, SER80D, THR68E, TYR78D, VAL11D, VAL50E, VAL69E, VAL77D, VAL9D
• E-F: ALA17E, ALA54F, ARG13E, ARG34E, ARG34F, ARG37E, ARG64F, ARG65F, ARG72E, ARG72F, ASN10E, ASN20E, ASN23F, ASN48E, ASN48F, ASN52F, ASN75E, ASN75F, ASP16E, ASP33E, ASP44F, ASP59E, ASP74E, ASP74F, GLN12E, GLU35E, GLU56F, GLU58E, GLY19E, GLY19F, GLY32E, GLY32F, GLY60E, GLY67F, GLY73E, GLY73F, HIS46E, HIS46F, ILE27E, ILE28E, ILE71F, ILE76E, ILE76F, ILE79E, LEU15E, LEU18E, LEU22F, LEU30E, LEU30F, LEU40F, LEU45E, LEU45F, LEU49E, LEU49F, LEU51F, LEU57E, LEU66F, LEU70F, LYS29E, LYS31E, LYS31F, LYS41F, MET47E, MET47F, PHE36F, PHE43E, PHE43F, PRO14E, PRO81E, SER21E, SER42F, SER80E, THR63F, THR68F, TYR78E, VAL11E, VAL50F, VAL69F, VAL77E, VAL9E
• F-G: ALA17F, ALA54G, ARG13F, ARG34F, ARG34G, ARG37F, ARG64G, ARG65G, ARG72F, ARG72G, ASN20F, ASN48F, ASN48G, ASN75F, ASN75G, ASP16F, ASP33F, ASP44G, ASP74F, ASP74G, GLN12F, GLU35F, GLU56G, GLU58G, GLY19F, GLY32F, GLY32G, GLY60F, GLY67G, GLY73F, GLY73G, HIS46F, HIS46G, ILE27F, ILE28F, ILE71G, ILE76F, ILE76G, ILE79F, LEU15F, LEU18F, LEU22G, LEU30F, LEU30G, LEU40F, LEU40G, LEU45F, LEU45G, LEU49F, LEU49G, LEU51G, LEU57F, LEU66G, LEU70G, LYS29F, LYS31F, LYS31G, LYS41G, MET47F, MET47G, PHE36F, PHE36G, PHE43F, PHE43G, PRO14F, PRO81F, SER21F, SER42G, SER80F, THR63G, THR68G, TYR78F, VAL50G, VAL69G, VAL77F