1MEL

crystal structure of a camel single-domain vh antibody fragment in complex with lysozyme

• Total interactions analyzed: 6
• Total true interactions: 3
• Strongest Interaction:
  • Chains: A-L
  • Int. Res.: 78
  • Norm. En. per Res.: -3.6824
• Hub Node: A(1)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-L	-43.1171	6.0213	-250.135	-287.2308	78	8	8	9052	0	7	7
B-M	-44.2358	4.1187	-218.341	-258.4581	78	11	8	8350	0	7	5
L-M	-22.8518	13.8953	-104.562	-113.5185	45	8	0	4188	0	9	14

Interface residues

• A-L: ALA104A, ALA107L, ALA110L, ALA95L, ARG112L, ARG45L, ARG61L, ARG73L, ASN103L, ASN106L, ASN113L, ASN44L, ASN46L, ASN52A, ASN59L, ASN74A, ASN77A, ASP101L, ASP48L, ASP52L, ASP99A, CYS109A, CYS33A, CYS64L, CYS94L, GLN57L, GLN72A, GLU108A, GLU35L, GLY102L, GLY104L, GLY112A, GLY119A, GLY30A, GLY49L, GLY54A, GLY55A, GLY56A, GLY71L, HIS111A, ILE102A, ILE29A, ILE57A, ILE58L, ILE98L, LEU56L, LEU75L, LYS116L, LYS97L, MET105L, MET53A, PRO31A, PRO70L, SER100A, SER105A, SER50L, SER60L, THR101A, THR115A, THR28A, THR47L, THR51L, THR58A, THR69L, TRP108L, TRP111L, TRP62L, TRP63L, TYR103A, TYR106A, TYR107A, TYR118A, TYR120A, TYR32A, TYR53L, TYR59A, VAL109L, VAL99L
• B-M: ALA104B, ALA107M, ALA110M, ALA31M, ALA95M, ARG112M, ARG45M, ARG61M, ARG73M, ASN103M, ASN106M, ASN113M, ASN44M, ASN46M, ASN52B, ASN59M, ASN74B, ASN74M, ASN77B, ASP101M, ASP121B, ASP48M, ASP52M, ASP99B, CYS109B, CYS33B, CYS64M, CYS94M, GLN57M, GLU108B, GLU35M, GLY102M, GLY104M, GLY119B, GLY30B, GLY49M, GLY54B, GLY55B, GLY56B, GLY71M, HIS111B, ILE102B, ILE29B, ILE57B, ILE58M, ILE98M, LEU56M, LEU75M, LYS116M, LYS97M, MET105M, MET53B, PRO31B, PRO70M, SER100B, SER105B, SER50M, SER60M, THR101B, THR28B, THR47M, THR51M, THR69M, TRP108M, TRP111M, TRP62M, TRP63M, TYR103B, TYR106B, TYR107B, TYR118B, TYR120B, TYR27B, TYR32B, TYR53M, TYR59B, VAL109M, VAL99M
• L-M: ALA110L, ALA122L, ALA122M, ARG114L, ARG114M, ARG125L, ARG125M, ARG5L, ARG5M, ASN113L, ASN37L, ASN37M, ASP119L, ASP119M, CYS115L, CYS127M, CYS30L, CYS6L, CYS6M, GLN121L, GLN121M, GLU7M, GLY117L, GLY126M, GLY4M, ILE124L, ILE124M, LEU8M, LYS116L, LYS33L, LYS33M, PHE34L, PHE34M, PHE38L, PHE38M, PHE3M, THR118L, THR118M, TRP123L, TRP123M, VAL120L, VAL120M, VAL29L, VAL29M, VAL2M