1M3D
structure of type iv collagen nc1 domains
Total interactions analyzed 66
Total true interactions 34
Strongest Interaction Chains K-L
Int. Res. 178
Norm. En. per Res. -4.8541
Hub Node A(5)
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Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -150.5369 2.2211 -616.312 -764.6278 183 38 17 24573 0 19 32
A-C -166.9136 -53.4021 -602.121 -822.4366 175 36 16 23154 3 28 31
A-D -53.6155 14.6153 -318.899 -357.8992 103 16 0 10159 4 22 23
A-E -34.0765 0.0 -107.256 -141.3325 64 5 2 4089 0 0 7
A-F 0.0 0.0 -0.2221 -0.2221 8 0 0 72 0 2 4
B-C -187.257 -39.8795 -634.202 -861.3385 180 30 18 24741 3 23 25
B-D -37.1948 0.0 -117.196 -154.3908 65 8 2 4230 0 0 7
B-E -10.1676 0.0 -10.7803 -20.9479 8 1 0 470 0 2 3
B-F -74.4556 32.3634 -336.809 -378.9012 106 23 1 10786 5 25 31
C-D 0.0 0.0 -0.1863 -0.1863 6 0 0 57 0 2 4
C-E -68.6727 35.4875 -325.328 -358.5132 104 36 1 10712 5 26 31
C-F 0.0 40.829 -89.9926 -49.1636 59 13 1 3784 0 12 13
D-E -144.3308 -21.3643 -642.024 -807.7192 186 33 17 24518 1 19 35
D-F -159.4355 -43.5472 -651.182 -854.1647 180 29 15 23806 4 28 33
D-G 0.0 -4.134 -0.5679 -4.7019 17 0 0 115 0 11 4
D-H -5.8249 -58.2386 -65.5435 -129.607 66 23 0 4098 5 13 15
D-L 0.0 0.0 294.048 294.048 19 43 0 479 0 0 0
E-F -205.1746 -40.1212 -654.32 -899.6157 187 34 19 25233 4 23 26
F-H 0.0 0.0 -0.0432 -0.0432 3 0 0 8 0 2 2
G-H -154.2161 -12.2743 -607.022 -773.5124 184 35 17 24379 1 20 34
G-I -150.3113 -40.9177 -637.803 -829.0321 175 34 15 23656 5 28 31
G-J -77.6943 10.9891 -336.297 -403.0023 106 18 0 10491 4 22 23
G-K -32.6912 0.0 -114.911 -147.6022 65 6 2 4133 0 0 7
G-L 0.0 0.0 -0.1907 -0.1907 7 0 0 57 0 2 4
H-I -195.1493 -38.1136 -647.242 -880.5049 182 35 19 25128 3 23 27
H-J -30.1506 0.0 -117.068 -147.2186 67 6 2 4225 0 0 7
H-K -9.7596 0.0 -13.2949 -23.0545 8 1 0 498 0 2 3
H-L -55.3907 41.6586 -331.048 -344.7801 104 26 1 10588 5 27 31
I-J 0.0 0.0 -0.1765 -0.1765 8 0 0 64 0 2 4
I-K -66.1102 35.0992 -318.574 -349.585 103 39 1 10606 5 26 31
I-L 0.0 47.122 -109.602 -62.48 58 11 1 3714 0 12 13
J-K -119.9791 8.2761 -606.384 -718.087 181 34 17 23775 0 18 31
J-L -142.7273 -33.1029 -647.801 -823.6312 175 33 15 23916 3 27 32
K-L -192.4856 -34.5665 -636.981 -864.0331 178 34 19 24519 3 23 25