1M0F

structural studies of bacteriophage alpha3 assembly, cryo- electron microscopy

• Total interactions analyzed: 21
• Total true interactions: 8
• Strongest Interaction:
  • Chains: 2-3
  • Int. Res.: 37
  • Norm. En. per Res.: -0.1193
• Hub Node: 1(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
1-2	0.0	0.0	-3.0615	-3.0615	57	0	0	693	0	0	0
1-F	0.0	0.0	-0.9638	-0.9638	19	0	0	234	0	0	0
1-G	0.0	0.0	-0.6844	-0.6844	11	0	0	104	0	0	0
2-3	0.0	0.0	-4.413	-4.413	37	1	0	498	0	0	0
3-4	0.0	0.0	-4.1761	-4.1761	56	0	0	713	0	0	0
3-F	0.0	0.0	-0.0144	-0.0144	2	0	0	10	0	0	0
4-F	0.0	0.0	-0.0086	-0.0086	6	0	0	13	0	0	0
F-B	0.0	0.0	102.191	102.191	52	16	0	781	0	0	0

Interface residues

• 1-2: ALA1172, ALA1182, ALA1222, ALA1292, ALA141, ALA161, ALA231, ALA251, ALA452, ALA731, ARG101, ARG1262, ARG1282, ASN1091, ASN902, GLN121, GLN72, GLN922, GLU1051, GLU1192, GLY1101, GLY671, HIS872, ILE1071, ILE1081, ILE1082, ILE211, ILE442, ILE912, LEU1202, LEU1252, LEU151, LEU201, LEU631, LEU962, LYS191, LYS412, PHE1212, PHE1232, PHE711, PHE771, PRO721, PRO741, PRO882, SER171, SER241, THR1041, THR131, THR621, THR932, TRP432, TYR681, VAL1272, VAL422, VAL661, VAL892, VAL91
• 1-F: ALA1011, ARG701, ASN153F, ASN383F, ASP337F, ASP382F, GLU1121, GLU991, GLY1001, GLY341F, GLY381F, MET981, PHE711, PRO691, PRO721, SER379F, SER491, THR380F, VAL1111
• 1-G: ALA1171, ALA1181, ALA1221, ARG145G, GLU1191, LEU1201, PHE1211, PHE1231, PRO144G, SER147G, THR146G
• 2-3: ALA1183, ALA162, ALA453, ARG102, ARG1133, ARG483, ASN1062, ASN1092, ASN903, ASP473, ASP642, GLN122, GLN923, GLU1193, GLY1102, GLY672, ILE1072, ILE1082, ILE443, ILE913, LEU1253, LEU963, LYS1163, PHE652, PRO742, PRO883, SER172, THR132, THR463, THR933, TRP433, TYR682, VAL1153, VAL423, VAL662, VAL893, VAL92
• 3-4: ALA1174, ALA1184, ALA1224, ALA1294, ALA143, ALA163, ALA233, ALA253, ALA454, ALA733, ARG103, ARG1264, ARG1284, ARG703, ASN1314, ASN404, ASN904, GLN123, GLN924, GLU1194, GLY1304, GLY673, HIS874, ILE1073, ILE1083, ILE213, ILE444, ILE914, LEU1254, LEU153, LEU203, LEU633, LEU964, PHE1214, PHE1234, PHE713, PHE773, PRO693, PRO723, PRO743, PRO884, SER173, SER243, THR1043, THR133, THR623, THR934, TRP434, TYR603, TYR683, VAL1274, VAL263, VAL424, VAL663, VAL894, VAL93
• 3-F: ASN1093, PRO96F
• 4-F: ALA1484, ASN1414, ASN91F, LYS1454, PRO94F, VAL90F
• F-B: ALA81B, ARG137F, ARG234F, ARG275F, ARG76B, ARG77B, ASN130F, ASN133F, ASN134F, ASN233F, ASP111B, ASP45F, GLN8B, GLU105B, GLU113B, GLU11F, GLU43F, GLY79B, GLY80B, HIS110B, HIS240F, HIS271F, ILE131F, LEU236F, LEU237F, LEU44F, LYS96B, MET239F, PHE106B, PHE109B, PHE117B, PHE120B, PHE136F, PHE276F, PHE277F, PHE78B, PRO139F, PRO235F, PRO274F, SER272F, SER75B, THR241F, THR69F, TRP99B, TYR107B, TYR119B, TYR132F, TYR135F, TYR418F, VAL114B, VAL238F, VAL273F