1M05

hla b8 in complex with an epstein barr virus determinant

• Total interactions analyzed: 15
• Total true interactions: 7
• Strongest Interaction:
  • Chains: A-E
  • Int. Res.: 95
  • Norm. En. per Res.: -5.304
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-52.6507	-71.7559	-369.511	-493.9177	124	7	2	12544	2	43	38
A-C	0.0	-3.6231	-19.5778	-23.2009	18	0	0	848	0	10	10
A-E	-61.3229	-94.5519	-348.002	-503.8767	95	20	7	11816	6	11	12
B-C	-3.4995	0.0	-30.7005	-34.2	27	10	0	1780	0	9	7
C-D	-47.2947	-71.597	-371.24	-490.1317	122	8	2	12441	3	42	38
C-F	-51.075	-97.118	-319.964	-468.157	94	22	7	11792	3	11	13
D-F	0.0	0.0	-0.0003	-0.0003	2	0	0	1	0	0	0

Interface residues

• A-B: ALA117A, ALA11A, ALA125A, ALA15B, ALA236A, ALA246A, ALA40A, ARG12B, ARG14A, ARG17A, ARG202A, ARG21A, ARG234A, ARG239A, ARG35A, ARG3B, ARG6A, ARG97B, ASN114A, ASN21B, ASN24B, ASP102A, ASP119A, ASP122A, ASP238A, ASP29A, ASP30A, ASP34B, ASP37A, ASP39A, ASP53B, ASP59B, ASP96B, ASP98B, ASP9A, CYS25B, GLN115A, GLN242A, GLN2B, GLN32A, GLN87A, GLN8B, GLN96A, GLU229A, GLU232A, GLY120A, GLY207A, GLY237A, GLY29B, HIS113A, HIS13B, HIS188A, HIS191A, HIS192A, HIS31B, HIS51B, HIS93A, ILE124A, ILE1B, ILE23A, ILE35B, ILE7B, LEU206A, LEU230A, LEU23B, LEU54B, LEU64B, LEU65B, LEU95A, LYS121A, LYS186A, LYS243A, LYS58B, LYS6B, MET12A, MET5A, MET98A, MET99B, PHE22B, PHE241A, PHE30B, PHE56B, PHE62B, PHE8A, PRO14B, PRO235A, PRO32B, SER11B, SER13A, SER24A, SER28B, SER33B, SER4A, SER52B, SER55B, SER57B, SER61B, SER92A, SER97A, THR10A, THR190A, THR200A, THR233A, THR240A, THR94A, TRP204A, TRP244A, TRP60B, TRP95B, TYR10B, TYR116A, TYR118A, TYR123A, TYR26B, TYR27A, TYR63B, TYR66B, TYR67B, TYR7A, TYR99A, VAL231A, VAL25A, VAL27B, VAL9B
• A-C: ALA90A, ARG170C, ARG82A, ASN86A, ASP119A, ASP61C, GLN87A, GLU58C, GLU89A, GLY56C, GLY91A, HIS93A, LYS121A, PRO57C, SER88A, SER92A, TYR59C, TYR85A
• A-E: ALA117A, ALA11A, ALA139A, ALA140A, ALA149A, ALA150A, ALA153A, ALA158A, ALA6E, ARG151A, ARG157A, ARG170A, ARG35A, ARG3E, ARG5E, ARG62A, ARG75A, ARG79A, ASN114A, ASN63A, ASN70A, ASN80A, ASP156A, ASP61A, ASP74A, ASP9A, CYS164A, GLN115A, GLN144A, GLN155A, GLN65A, GLN72A, GLN96A, GLU166A, GLU55A, GLU58A, GLU76A, GLY100A, GLY26A, GLY4E, GLY8E, HIS113A, ILE124A, ILE142A, ILE23A, ILE52A, ILE66A, LEU126A, LEU160A, LEU168A, LEU2E, LEU78A, LEU81A, LEU95A, LEU9E, LYS146A, LYS68A, MET5A, MET98A, PHE1E, PHE22A, PHE33A, PHE36A, PHE67A, PHE8A, SER24A, SER77A, SER97A, THR10A, THR143A, THR163A, THR64A, THR69A, THR71A, THR73A, TRP133A, TRP147A, TRP167A, TRP51A, TRP60A, TYR116A, TYR118A, TYR123A, TYR159A, TYR171A, TYR59A, TYR7A, TYR7E, TYR84A, TYR85A, TYR99A, VAL152A, VAL25A, VAL28A, VAL34A
• B-C: ARG170C, ARG3B, ASN174C, ASP177C, GLN2B, GLN54C, GLU173C, GLU53C, GLU55C, GLY175C, GLY56C, HIS31B, HIS84B, ILE1B, ILE52C, LEU87B, LYS176C, LYS6B, PRO32B, PRO50C, SER88B, THR4B, THR86B, TRP167C, TRP51C, TYR171C, VAL85B
• C-D: ALA117C, ALA11C, ALA125C, ALA15D, ALA236C, ALA246C, ALA40C, ARG12D, ARG14C, ARG17C, ARG202C, ARG21C, ARG234C, ARG239C, ARG35C, ARG3D, ARG6C, ARG97D, ASN114C, ASN21D, ASN24D, ASP102C, ASP119C, ASP122C, ASP238C, ASP29C, ASP30C, ASP34D, ASP37C, ASP39C, ASP53D, ASP59D, ASP96D, ASP98D, ASP9C, CYS25D, GLN115C, GLN242C, GLN2D, GLN32C, GLN87C, GLN8D, GLN96C, GLU229C, GLU232C, GLY120C, GLY207C, GLY237C, GLY29D, HIS113C, HIS13D, HIS188C, HIS191C, HIS192C, HIS31D, HIS51D, HIS93C, ILE124C, ILE1D, ILE23C, ILE35D, ILE7D, LEU206C, LEU230C, LEU23D, LEU54D, LEU64D, LEU65D, LEU95C, LYS121C, LYS186C, LYS243C, LYS58D, LYS6D, MET12C, MET98C, MET99D, PHE22D, PHE241C, PHE30D, PHE56D, PHE62D, PHE8C, PRO14D, PRO235C, PRO32D, SER11D, SER24C, SER28D, SER33D, SER4C, SER52D, SER55D, SER57D, SER61D, SER92C, SER97C, THR10C, THR190C, THR200C, THR233C, THR240C, THR94C, TRP204C, TRP244C, TRP60D, TRP95D, TYR10D, TYR116C, TYR118C, TYR123C, TYR26D, TYR27C, TYR63D, TYR66D, TYR67D, TYR7C, TYR99C, VAL231C, VAL25C, VAL27D, VAL9D
• C-F: ALA117C, ALA11C, ALA139C, ALA140C, ALA149C, ALA150C, ALA158C, ALA6F, ARG151C, ARG157C, ARG170C, ARG35C, ARG3F, ARG5F, ARG62C, ARG75C, ARG79C, ASN114C, ASN63C, ASN70C, ASN80C, ASP156C, ASP61C, ASP74C, ASP9C, CYS164C, GLN115C, GLN144C, GLN155C, GLN65C, GLN72C, GLN96C, GLU166C, GLU55C, GLU58C, GLU76C, GLY100C, GLY26C, GLY4F, GLY8F, HIS113C, ILE124C, ILE142C, ILE23C, ILE52C, ILE66C, LEU126C, LEU160C, LEU168C, LEU2F, LEU78C, LEU81C, LEU95C, LEU9F, LYS146C, LYS68C, MET5C, MET98C, PHE1F, PHE22C, PHE33C, PHE36C, PHE67C, PHE8C, SER24C, SER77C, SER97C, THR10C, THR143C, THR163C, THR64C, THR69C, THR71C, THR73C, TRP133C, TRP147C, TRP167C, TRP51C, TRP60C, TYR116C, TYR118C, TYR123C, TYR159C, TYR171C, TYR59C, TYR7C, TYR7F, TYR84C, TYR85C, TYR99C, VAL152C, VAL25C, VAL28C, VAL34C
• D-F: ARG5F, PHE56D