1CFS

anti-p24 (hiv-1) fab fragment cb41 complexed with an epitope-unrelated peptide

• Total interactions analyzed: 3
• Total true interactions: 3
• Strongest Interaction:
  • Chains: A-C
  • Int. Res.: 34
  • Norm. En. per Res.: -4.2482
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-11.3715	-19.5273	-417.512	-448.4108	179	16	10	17312	1	22	14
A-C	-17.3224	-14.042	-113.074	-144.4384	34	2	2	3365	0	4	1
B-C	-18.0856	-4.4808	-91.4576	-114.024	39	3	1	3483	0	5	7

Interface residues

• A-B: ALA100A, ALA130A, ALA167B, ALA59B, ARG212B, ARG98B, ASN137A, ASN138A, ASN210A, ASN212A, ASN61B, ASP100B, ASP161A, ASP167A, ASP170A, ASP1A, ASP1A5, ASP93A, CB9.96761-6.67257, CYS127B, CYS134A, CYS139B, CYS214A, CYS88A, CYS96B, GLN104B, GLN124A, GLN170B, GLN1B, GLN38A, GLN39B, GLN62B, GLN6A, GLN6B, GLN90A, GLU123A, GLU165A, GLU210B, GLU213A, GLU33B, GLU46B, GLY101A, GLY103B, GLY105B, GLY128A, GLY128B, GLY129A, GLY129B, GLY138B, GLY143B, GLY158A, GLY161B, GLY41A, GLY44B, GLY49B, GLY50B, GLY57A, GLY99A, HIS163B, HIS35B, HIS43B, ILE117A, ILE209B, ILE48B, ILE56A, ILE85A, LEU123B, LEU125A, LEU136A, LEU137B, LEU140B, LEU151B, LEU160A, LEU168B, LEU169B, LEU173B, LEU176B, LEU179A, LEU181A, LEU45B, LEU47A, LEU89A, LEU96A, LYS103A, LYS142B, LYS169A, LYS207A, LYS207B, LYS208B, LYS38B, LYS39A, LYS42A, LYS45A, LYS63B, LYS99B, MET175A, MET55A, PHE118A, PHE135A, PHE139A, PHE165B, PHE209A, PHE36A, PHE64B, PHE94A, PHE98A, PRO119A, PRO120A, PRO122B, PRO125B, PRO166B, PRO40A, PRO41B, PRO44A, PRO95A, SER116A, SER119B, SER121A, SER122A, SER127A, SER131A, SER134B, SER160B, SER162A, SER171B, SER174A, SER176A, SER177A, SER177B, SER178B, SER179B, SER208A, SER43A, THR114A, THR126A, THR130B, THR136B, THR164A, THR164B, THR172A, THR175B, THR178A, THR180A, THR181B, THR34A, THR40B, THR46A, THR97A, THR97B, TRP102B, TRP153B, TRP163A, TRP36B, TRP47B, TYR101B, TYR121B, TYR173A, TYR174B, TYR49A, TYR60B, TYR86A, TYR87A, TYR91A, TYR95B, VAL115A, VAL120B, VAL124B, VAL126B, VAL132A, VAL133A, VAL135B, VAL141B, VAL159A, VAL162B, VAL180B, VAL213B, VAL37B, VAL42B, VAL93B
• A-C: ALA8C, ARG50A, ARG53A, ARG9C, ASN30A, ASP92A, ASP93A, GLN90A, GLU4C, GLY6C, GLY7C, ILE10C, ILE29A, ILE48A, ILE56A, LEU2C, LEU33A, LEU47A, LEU89A, LEU96A, MET55A, PHE32A, PHE36A, PHE94A, PRO95A, SER31A, THR11C, THR34A, THR46A, TRP35A, TRP5C, TYR3C, TYR49A, TYR91A
• B-C: ALA59B, ALA8C, ARG98B, ARG9C, ASP100B, ASP31B, GLN1B, GLU33B, GLU4C, GLY1C, GLY49B, GLY50B, GLY54B, GLY57B, GLY6C, GLY7C, HIS35B, HIS52B, ILE10C, ILE34B, ILE51B, LEU2C, LEU70B, LYS99B, PRO53B, SER55B, SER56B, THR11C, THR58B, THR97B, TRP102B, TRP36B, TRP47B, TRP5C, TYR101B, TYR27B, TYR32B, TYR3C, TYR60B