Search Results for "sequence"
  1. ALISTAT - Simple Alignment Statistics
  2. Atm2Seq - Converts PDB format file into a PIR formatted sequence file
  3. CAPSBlast - Sequence search against databases from CAPS
  4. Predict CoiledCoil - Predicting coiled-coil from sequence input
  5. FMALIGN - Multiple alignment of protein sequences
  6. Joy - A set of tools for protein sequence-structure representation and analysis
  7. MegaCC - MOLECULAR EVOLUTIONARY GENETICS ANALYSIS
  8. Modeller - Models three-dimensional structures of proteins and their assemblies by satisfaction of spatial restraints
  9. MOTIFS Homologous - Identifies Motifs on a sequence using homologous
  10. MOTIFS - Identify Motifs from a set of sequence or alignment
  11. Phylip-Consense - Consensus tree program from Phylip
  12. Phylip-Kitsch - Fitch: Margoliash and Least Squares Methods with Evolutionary Clock
  13. Phylip-Neighbor - Neighbor: Joining and UPGMA methods
  14. Phylip-Proml - Protein Maximum Likelihood program
  15. Phylip-Promlk - Protein maximum likelihood program with molecular clock
  16. Phylip-Protdist - Program to compute distance matrix from protein sequences
  17. Phylip-Protpars - Protein Sequence Parsimony Method
  18. Phylip-Seqboot - a general bootstrapping and data set translation tool
  19. PSIPRED - protein secondary structure prediction
  20. PURE - Prediction of Unassigned REgions
  21. RaxML - Randomized Axelerated Maximum Likelihood
  22. SeqConverter - Sequence file format converter
  23. SeqPlot - Consensus sequence analysis - plotting program based on various amino acid indices
  24. SeqReport - provides extensive sequence analysis results
  25. CAPSPHIBlast - Pattern-hit initiated BLAST search against databases from CAPS
  26. CAPSPSIBlast - Position-Specific Iterated BLAST search against databases from CAPS
  27. CAPSHMMER - Biological sequence analysis using profile hidden Markov models against databases from CAPS
  28. LocateMotif - Locate Motifs in a set of sequence