Search Results for "sequence"
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ALISTAT - Simple Alignment Statistics
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Atm2Seq - Converts PDB format file into a PIR formatted sequence file
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CAPSBlast - Sequence search against databases from CAPS
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Predict CoiledCoil - Predicting coiled-coil from sequence input
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FMALIGN - Multiple alignment of protein sequences
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Joy - A set of tools for protein sequence-structure representation and analysis
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MegaCC - MOLECULAR EVOLUTIONARY GENETICS ANALYSIS
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Modeller - Models three-dimensional structures of proteins and their assemblies by satisfaction of spatial restraints
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MOTIFS Homologous - Identifies Motifs on a sequence using homologous
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MOTIFS - Identify Motifs from a set of sequence or alignment
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Phylip-Consense - Consensus tree program from Phylip
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Phylip-Kitsch - Fitch: Margoliash and Least Squares Methods with Evolutionary Clock
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Phylip-Neighbor - Neighbor: Joining and UPGMA methods
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Phylip-Proml - Protein Maximum Likelihood program
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Phylip-Promlk - Protein maximum likelihood program with molecular clock
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Phylip-Protdist - Program to compute distance matrix from protein sequences
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Phylip-Protpars - Protein Sequence Parsimony Method
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Phylip-Seqboot - a general bootstrapping and data set translation tool
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PSIPRED - protein secondary structure prediction
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PURE - Prediction of Unassigned REgions
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RaxML - Randomized Axelerated Maximum Likelihood
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SeqConverter - Sequence file format converter
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SeqPlot - Consensus sequence analysis - plotting program based on various amino acid indices
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SeqReport - provides extensive sequence analysis results
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CAPSPHIBlast - Pattern-hit initiated BLAST search against databases from CAPS
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CAPSPSIBlast - Position-Specific Iterated BLAST search against databases from CAPS
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CAPSHMMER - Biological sequence analysis using profile hidden Markov models against databases from CAPS
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LocateMotif - Locate Motifs in a set of sequence