MegaCC - MOLECULAR EVOLUTIONARY GENETICS ANALYSIS

Phylip-Consense - Consensus tree program from Phylip

Phylip-Kitsch - Fitch: Margoliash and Least Squares Methods with Evolutionary Clock

Phylip-Neighbor - Neighbor: Joining and UPGMA methods

Phylip-Proml - Protein Maximum Likelihood program

Phylip-Promlk - Protein maximum likelihood program with molecular clock

Phylip-Protdist - Program to compute distance matrix from protein sequences

Phylip-Protpars - Protein Sequence Parsimony Method

Phylip-Seqboot - a general bootstrapping and data set translation tool

RaxML - Randomized Axelerated Maximum Likelihood