IWS 2.0
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Search Results for "alignment"
  • List of Modules - 13
  • Additional Resources - 2
  1. ALISTAT - Simple Alignment Statistics
  2. FMALIGN - Multiple alignment of protein sequences
  3. MOTIFS - Identify Motifs from a set of sequence or alignment
  4. Phylip-Consense - Consensus tree program from Phylip
  5. Phylip-Kitsch - Fitch: Margoliash and Least Squares Methods with Evolutionary Clock
  6. Phylip-Neighbor - Neighbor: Joining and UPGMA methods
  7. Phylip-Proml - Protein Maximum Likelihood program
  8. Phylip-Promlk - Protein maximum likelihood program with molecular clock
  9. Phylip-Protdist - Program to compute distance matrix from protein sequences
  10. Phylip-Protpars - Protein Sequence Parsimony Method
  11. Phylip-Seqboot - a general bootstrapping and data set translation tool
  12. RaxML - Randomized Axelerated Maximum Likelihood
  13. Super - Calculate RMS Deviation between 2 structures
  1. PASS2 - Protein alignments organised as structural superfamilies
  2. SCANMOT - Scan motifs

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Contact: Prof. R. Sowdhamini - mini@ncbs.res.in