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STiFdb [Stress Gene Transcription Factor Database] - Browse Page :
Browse the database based on three criterias - Browse Index :

1. Browse by Gene
Users can browse STIFDB using TAIR Gene names. Genes are also classified according to different chromosomes.
Chromosome NumberNo. of Stress Related Genes(1000bp)List of Genes
1 647 Link
2 409 Link
3 548 Link
4 440 Link
5 585 Link

2. Browse by Transcription Factors:

Various information related to Stress responsive Transcription Factors are provided in STIFDB. Information includes Transcription Family Name, Subfamily Name, Short Description, Stress signals, Name of Cis element, Cis-element sequence, Literature references and LinkOut to related resources that provides more information about these transcription factors re also provided. STIFDB provides a non-redundant collection of abiotic stress responsive genes in Arabidopsis thaliana, with details about probable Transcription Factor Binding Sites in their promoters as predicted by a rigorous Hidden Markov Model based search method called STIF. In response to abiotic stresses like drought, cold, salinity, high light, heat, etc, 10 specific families of transcription factors are known to be involved. HMM-based models are used to identify binding sites of transcription factors belonging to these families. We have also consulted literature to cross-validate the Transcription Factor Binding Sites predicted by the STIF method.

Representative ColorTranscription FactorFrequency in STIFDBSearch Link
    ABRE_ABI3_VP1
5Link
    AuxRE_ARF
1174Link
    C_ABRE_bZIP
205Link
    DREB_AP2_EREBP
815Link
    G_ABRE_bZIP
145Link
    G_box1_bZIP
88Link
    G_box2_bZIP
856Link
    G_box_bHLH
781Link
    GCC_box_AP2_EREBP
260Link
    HBE_HB
154Link
    HSE1_HSF
2097Link
    Myb_box1_MYB
1935Link
    Myb_box2_MYB
882Link
    Myb_box3_MYB
1080Link
    Myb_box4_MYB
567Link
    Myb_box5_MYB
2628Link
    Nac_box_NAC
846Link
    N_box_bHLH
579Link
    W_box_WRKY
1734Link

3. Browse by Stress Signals [STIFDB : Stress Profile]
Stress SignalNo. of Responsive Genes(1000bp)STIFDB : Stress Profile
ABA 643Link
COLD 1063Link
DROUGHT 706Link
LIGHT 610Link
NaCl977Link
OXIDATIVE-STRESS39Link
REHYDRATION93Link
COLD-DROUGHT-SALT41Link


Browse by Gene Name [TAIR Accession Name] Browse By Chromosome:

Chromosome 1:
AT1G01010
AT1G01060
AT1G01120
AT1G01140
AT1G01160
AT1G01470
AT1G01550
AT1G01600
AT1G01620
AT1G01720
AT1G01800
AT1G01860
AT1G02280
AT1G02660
AT1G02810
AT1G02850
AT1G02870
AT1G02920
AT1G02930
AT1G03090
AT1G03220
AT1G03250
AT1G03520
AT1G03610
AT1G03870
AT1G03930
AT1G04170
AT1G04220
AT1G04430
AT1G04550
AT1G04570
AT1G04690
AT1G04960
AT1G04990
AT1G05170
AT1G05250
AT1G05340
AT1G05520
AT1G05560
AT1G05680
AT1G05690
AT1G05710
AT1G05760
AT1G05805
AT1G05890
AT1G06040
AT1G06180
AT1G06190
AT1G06200
AT1G06220
AT1G06430
AT1G06570
AT1G06650
AT1G06680
AT1G06690
AT1G06700
AT1G06760
AT1G07010
AT1G07040
AT1G07230
AT1G07310
AT1G07360
AT1G07470
AT1G07670
AT1G07720
AT1G07750
AT1G07770
AT1G07810
AT1G07870
AT1G07890
AT1G07920
AT1G08090
AT1G08200
AT1G08380
AT1G08450
AT1G08500
AT1G08510
AT1G08640
AT1G08800
AT1G08830
AT1G08890
AT1G08920
AT1G08930
AT1G08980
AT1G09100
AT1G09150
AT1G09210
AT1G09270
AT1G09340
AT1G09350
AT1G09430
AT1G09500
AT1G09570
AT1G09620
AT1G09690
AT1G09700
AT1G09780
AT1G09840
AT1G09970
AT1G10020
AT1G10070
AT1G10370
AT1G10410
AT1G10470
AT1G10490
AT1G10550
AT1G10585
AT1G10740
AT1G10840
AT1G10950
AT1G11180
AT1G11260
AT1G11310
AT1G11480
AT1G11840
AT1G11860
AT1G11960
AT1G12010
AT1G12080
AT1G12090
AT1G12230
AT1G12240
AT1G12370
AT1G12520
AT1G12770
AT1G12830
AT1G12840
AT1G12900
AT1G12930
AT1G12990
AT1G13190
AT1G13260
AT1G13560
AT1G13930
AT1G13990
AT1G14210
AT1G14570
AT1G14650
AT1G14670
AT1G14720
AT1G14810
AT1G14830
AT1G14890
AT1G14950
AT1G14960
AT1G15100
AT1G15130
AT1G15140
AT1G15180
AT1G15200
AT1G15270
AT1G15340
AT1G15690
AT1G15740
AT1G15820
AT1G15880
AT1G15930
AT1G15950
AT1G16010
AT1G16410
AT1G16470
AT1G16540
AT1G16610
AT1G16810
AT1G16850
AT1G16860
AT1G16880
AT1G17020
AT1G17100
AT1G17160
AT1G17290
AT1G17370
AT1G17720
AT1G17830
AT1G17840
AT1G17870
AT1G18060
AT1G18070
AT1G18150
AT1G18330
AT1G18540
AT1G18570
AT1G18580
AT1G18710
AT1G18890
AT1G19000
AT1G19050
AT1G19170
AT1G19180
AT1G19350
AT1G19400
AT1G19440
AT1G19450
AT1G19540
AT1G19570
AT1G19650
AT1G19660
AT1G19740
AT1G19910
AT1G20010
AT1G20100
AT1G20110
AT1G20330
AT1G20340
AT1G20440
AT1G20450
AT1G20510
AT1G20620
AT1G20630
AT1G20880
AT1G20950
AT1G20980
AT1G21000
AT1G21250
AT1G21270
AT1G21500
AT1G21610
AT1G21640
AT1G21720
AT1G21790
AT1G22020
AT1G22190
AT1G22200
AT1G22300
AT1G22360
AT1G22370
AT1G22640
AT1G22710
AT1G22730
AT1G22750
AT1G22770
AT1G22940
AT1G22990
AT1G23260
AT1G23710
AT1G23780
AT1G23800
AT1G23880
AT1G24240
AT1G24280
AT1G24360
AT1G25220
AT1G25280
AT1G25350
AT1G25440
AT1G25490
AT1G25560
AT1G26270
AT1G26380
AT1G26470
AT1G26650
AT1G27000
AT1G27020
AT1G27200
AT1G27290
AT1G27300
AT1G27310
AT1G27400
AT1G27410
AT1G27480
AT1G27510
AT1G27530
AT1G27540
AT1G27730
AT1G27760
AT1G28200
AT1G28240
AT1G28320
AT1G28330
AT1G28380
AT1G28490
AT1G28580
AT1G28670
AT1G28680
AT1G29310
AT1G29500
AT1G29660
AT1G29670
AT1G29910
AT1G29920
AT1G29930
AT1G29940
AT1G30100
AT1G30360
AT1G30400
AT1G30520
AT1G30630
AT1G30640
AT1G30690
AT1G30700
AT1G30760
AT1G30890
AT1G30970
AT1G31070
AT1G31230
AT1G31330
AT1G31440
AT1G31580
AT1G32050
AT1G32060
AT1G32080
AT1G32230
AT1G32470
AT1G32500
AT1G32640
AT1G32860
AT1G32870
AT1G32900
AT1G32920
AT1G33590
AT1G33780
AT1G33800
AT1G33980
AT1G34000
AT1G34190
AT1G34780
AT1G35620
AT1G35670
AT1G35720
AT1G36980
AT1G37130
AT1G42550
AT1G42960
AT1G42970
AT1G42990
AT1G43160
AT1G43670
AT1G43890
AT1G44350
AT1G44446
AT1G44575
AT1G44810
AT1G45000
AT1G45249
AT1G46768
AT1G47128
AT1G47420
AT1G47490
AT1G47530
AT1G47710
AT1G47970
AT1G48000
AT1G48100
AT1G48370
AT1G48410
AT1G48430
AT1G48440
AT1G48490
AT1G48570
AT1G48600
AT1G48750
AT1G49200
AT1G49240
AT1G49450
AT1G49570
AT1G49660
AT1G49720
AT1G49970
AT1G50010
AT1G50250
AT1G50300
AT1G50370
AT1G50410
AT1G50480
AT1G50660
AT1G51090
AT1G51140
AT1G51400
AT1G51560
AT1G51610
AT1G51680
AT1G51710
AT1G51760
AT1G51950
AT1G52000
AT1G52050
AT1G52070
AT1G52220
AT1G52230
AT1G52340
AT1G52400
AT1G52410
AT1G52690
AT1G52740
AT1G52760
AT1G52870
AT1G52980
AT1G53090
AT1G53170
AT1G53210
AT1G53280
AT1G53310
AT1G53320
AT1G53400
AT1G53500
AT1G53510
AT1G53570
AT1G53580
AT1G54000
AT1G54010
AT1G54100
AT1G54120
AT1G54270
AT1G54320
AT1G54500
AT1G54780
AT1G54870
AT1G55040
AT1G55310
AT1G55330
AT1G55490
AT1G55530
AT1G55540
AT1G55670
AT1G55680
AT1G55840
AT1G55920
AT1G56070
AT1G56220
AT1G56280
AT1G56300
AT1G56340
AT1G56600
AT1G56650
AT1G56660
AT1G58200
AT1G58270
AT1G58360
AT1G59610
AT1G59700
AT1G59710
AT1G59750
AT1G59900
AT1G59960
AT1G59990
AT1G60170
AT1G60470
AT1G60650
AT1G60680
AT1G60710
AT1G60730
AT1G60940
AT1G61250
AT1G61800
AT1G61890
AT1G61990
AT1G62050
AT1G62180
AT1G62380
AT1G62390
AT1G62560
AT1G62570
AT1G62660
AT1G62710
AT1G62750
AT1G63460
AT1G63490
AT1G63710
AT1G63720
AT1G63940
AT1G64040
AT1G64110
AT1G64390
AT1G64520
AT1G64660
AT1G64680
AT1G64740
AT1G64780
AT1G64850
AT1G64890
AT1G64950
AT1G65220
AT1G65310
AT1G65390
AT1G65720
AT1G65860
AT1G65960
AT1G65980
AT1G66140
AT1G66160
AT1G66260
AT1G66270
AT1G66280
AT1G66760
AT1G66960
AT1G66970
AT1G67090
AT1G67300
AT1G67580
AT1G67740
AT1G67840
AT1G67850
AT1G68010
AT1G68020
AT1G68220
AT1G68440
AT1G68520
AT1G68580
AT1G68620
AT1G68820
AT1G68980
AT1G69295
AT1G69340
AT1G69360
AT1G69370
AT1G69410
AT1G69490
AT1G69530
AT1G69680
AT1G69840
AT1G69870
AT1G69890
AT1G70000
AT1G70100
AT1G70300
AT1G70330
AT1G70580
AT1G70770
AT1G70780
AT1G70810
AT1G70900
AT1G71030
AT1G71310
AT1G71697
AT1G71810
AT1G71820
AT1G71830
AT1G71880
AT1G72130
AT1G72150
AT1G72260
AT1G72340
AT1G72370
AT1G72520
AT1G72610
AT1G72630
AT1G72680
AT1G72710
AT1G72740
AT1G72770
AT1G72790
AT1G72800
AT1G72820
AT1G73030
AT1G73260
AT1G73330
AT1G73390
AT1G73480
AT1G73490
AT1G73680
AT1G73880
AT1G73920
AT1G73980
AT1G74020
AT1G74050
AT1G74100
AT1G74230
AT1G74310
AT1G74320
AT1G74840
AT1G74930
AT1G74950
AT1G74960
AT1G75040
AT1G75110
AT1G75200
AT1G75270
AT1G75500
AT1G75770
AT1G75830
AT1G75950
AT1G76180
AT1G76520
AT1G76670
AT1G76710
AT1G76990
AT1G77060
AT1G77120
AT1G77350
AT1G77490
AT1G77510
AT1G77740
AT1G77760
AT1G77840
AT1G78070
AT1G78080
AT1G78240
AT1G78370
AT1G78380
AT1G78390
AT1G78410
AT1G78420
AT1G78440
AT1G78510
AT1G78570
AT1G78600
AT1G78670
AT1G78820
AT1G78830
AT1G78850
AT1G78880
AT1G78900
AT1G78920
AT1G78970
AT1G79010
AT1G79270
AT1G79340
AT1G79380
AT1G79430
AT1G79520
AT1G79560
AT1G79690
AT1G79730
AT1G79820
AT1G79840
AT1G79920
AT1G80160
AT1G80180
AT1G80240
AT1G80270
AT1G80310
AT1G80380
AT1G80460
AT1G80530
AT1G80600
AT1G80770
AT1G80840
AT1G80920
AT1G80950
AT1G04580
AT1G05700
AT1G07600
AT1G10170
AT1G21520
AT1G23230
AT1G25270
AT1G33390
AT1G48030
AT1G48640
AT1G59359
AT1G60190
AT1G60220
AT1G60260
AT1G71010
AT1G72120
AT1G73600
AT1G78860



Chromosome 2:     [Click here to go to Chromosome Index]
AT2G01090
AT2G01140
AT2G01250
AT2G01340
AT2G01540
AT2G01590
AT2G01600
AT2G01720
AT2G01970
AT2G01980
AT2G02100
AT2G02130
AT2G02160
AT2G02515
AT2G02710
AT2G02760
AT2G02810
AT2G02990
AT2G03350
AT2G03390
AT2G03760
AT2G03890
AT2G04240
AT2G04460
AT2G04520
AT2G04690
AT2G05070
AT2G05100
AT2G05380
AT2G05540
AT2G05940
AT2G06050
AT2G06520
AT2G06850
AT2G10940
AT2G11520
AT2G13360
AT2G13540
AT2G13610
AT2G13790
AT2G14560
AT2G14610
AT2G14835
AT2G14880
AT2G14890
AT2G15480
AT2G15620
AT2G15690
AT2G15970
AT2G16005
AT2G16280
AT2G16500
AT2G16700
AT2G16720
AT2G16890
AT2G16950
AT2G17190
AT2G17200
AT2G17280
AT2G17290
AT2G17360
AT2G17410
AT2G17840
AT2G17870
AT2G17980
AT2G18050
AT2G18160
AT2G18170
AT2G18193
AT2G18400
AT2G18750
AT2G18900
AT2G19160
AT2G19180
AT2G19270
AT2G19310
AT2G19390
AT2G19570
AT2G19590
AT2G19650
AT2G19790
AT2G19800
AT2G19830
AT2G19860
AT2G19900
AT2G19990
AT2G20610
AT2G20740
AT2G20790
AT2G20860
AT2G20880
AT2G20960
AT2G20990
AT2G21050
AT2G21070
AT2G21160
AT2G21180
AT2G21320
AT2G21330
AT2G21380
AT2G21430
AT2G21580
AT2G21620
AT2G21660
AT2G22080
AT2G22230
AT2G22240
AT2G22310
AT2G22430
AT2G22470
AT2G22500
AT2G22590
AT2G22660
AT2G22980
AT2G22990
AT2G23070
AT2G23080
AT2G23110
AT2G23120
AT2G23150
AT2G23320
AT2G23340
AT2G23460
AT2G24100
AT2G24150
AT2G24200
AT2G24360
AT2G24420
AT2G24500
AT2G24540
AT2G24790
AT2G25070
AT2G25080
AT2G25110
AT2G25140
AT2G25430
AT2G25450
AT2G25490
AT2G25520
AT2G25625
AT2G25850
AT2G26230
AT2G26250
AT2G26300
AT2G26530
AT2G26560
AT2G26740
AT2G26800
AT2G26980
AT2G27050
AT2G27080
AT2G27100
AT2G27150
AT2G27420
AT2G27600
AT2G27690
AT2G27730
AT2G28120
AT2G28190
AT2G28320
AT2G28370
AT2G28400
AT2G28470
AT2G28550
AT2G28570
AT2G28690
AT2G28800
AT2G28840
AT2G29080
AT2G29340
AT2G29360
AT2G29440
AT2G29450
AT2G29460
AT2G29500
AT2G29550
AT2G29700
AT2G30040
AT2G30140
AT2G30250
AT2G30360
AT2G30440
AT2G30470
AT2G30490
AT2G30550
AT2G30590
AT2G30860
AT2G30870
AT2G30920
AT2G30970
AT2G31070
AT2G31180
AT2G31360
AT2G31380
AT2G31570
AT2G31730
AT2G31750
AT2G31790
AT2G31810
AT2G31890
AT2G32020
AT2G32210
AT2G32240
AT2G32700
AT2G32800
AT2G32900
AT2G32920
AT2G33040
AT2G33120
AT2G33150
AT2G33210
AT2G33340
AT2G33380
AT2G33480
AT2G33500
AT2G33590
AT2G33730
AT2G33830
AT2G34250
AT2G34300
AT2G34500
AT2G34520
AT2G34770
AT2G34850
AT2G34930
AT2G35020
AT2G35510
AT2G35680
AT2G35710
AT2G35790
AT2G35840
AT2G35940
AT2G36170
AT2G36220
AT2G36250
AT2G36270
AT2G36530
AT2G36780
AT2G36800
AT2G36830
AT2G36870
AT2G36880
AT2G36900
AT2G36930
AT2G36950
AT2G37040
AT2G37110
AT2G37170
AT2G37180
AT2G37340
AT2G37500
AT2G37550
AT2G37570
AT2G37630
AT2G37760
AT2G37870
AT2G37970
AT2G38000
AT2G38040
AT2G38050
AT2G38170
AT2G38240
AT2G38280
AT2G38310
AT2G38320
AT2G38400
AT2G38470
AT2G38480
AT2G38530
AT2G38540
AT2G38610
AT2G38670
AT2G38750
AT2G38820
AT2G38860
AT2G38870
AT2G39010
AT2G39030
AT2G39040
AT2G39200
AT2G39210
AT2G39420
AT2G39570
AT2G39720
AT2G39730
AT2G39770
AT2G39800
AT2G39810
AT2G39980
AT2G39990
AT2G40000
AT2G40080
AT2G40140
AT2G40330
AT2G40360
AT2G40410
AT2G40610
AT2G40630
AT2G40800
AT2G40880
AT2G40890
AT2G40900
AT2G40930
AT2G40940
AT2G41010
AT2G41100
AT2G41110
AT2G41190
AT2G41260
AT2G41280
AT2G41430
AT2G41530
AT2G41560
AT2G41620
AT2G41640
AT2G41810
AT2G41870
AT2G41900
AT2G41960
AT2G42220
AT2G42230
AT2G42450
AT2G42530
AT2G42540
AT2G42680
AT2G42760
AT2G42790
AT2G42810
AT2G42840
AT2G42890
AT2G43020
AT2G43090
AT2G43210
AT2G43290
AT2G43400
AT2G43510
AT2G43570
AT2G43710
AT2G43750
AT2G43790
AT2G43970
AT2G44050
AT2G44090
AT2G44100
AT2G44120
AT2G44350
AT2G44410
AT2G44640
AT2G44680
AT2G44790
AT2G44840
AT2G44920
AT2G45010
AT2G45180
AT2G45470
AT2G45570
AT2G45660
AT2G45680
AT2G45740
AT2G45820
AT2G45960
AT2G45980
AT2G45990
AT2G46060
AT2G46080
AT2G46260
AT2G46270
AT2G46330
AT2G46370
AT2G46500
AT2G46510
AT2G46540
AT2G46680
AT2G46790
AT2G46820
AT2G46830
AT2G46900
AT2G46970
AT2G47170
AT2G47180
AT2G47190
AT2G47510
AT2G47590
AT2G47650
AT2G47710
AT2G47730
AT2G47770
AT2G48070
AT2G48150
AT2G01010
AT2G01020
AT2G03260
AT2G06950
AT2G16080
AT2G17460
AT2G18700
AT2G24110
AT2G27310
AT2G27850
AT2G28960
AT2G28970
AT2G30020
AT2G33540
AT2G38800
AT2G40220
AT2G43150
AT2G43620
AT2G43780
AT2G44990
Chromosome 3:     [Click here to go to Chromosome Index]
AT3G01190
AT3G01280
AT3G01420
AT3G01500
AT3G01540
AT3G01820
AT3G01850
AT3G01910
AT3G02200
AT3G02230
AT3G02380
AT3G02420
AT3G02450
AT3G02470
AT3G02480
AT3G02520
AT3G02530
AT3G02640
AT3G02690
AT3G02720
AT3G02870
AT3G03020
AT3G03050
AT3G03100
AT3G03220
AT3G03250
AT3G03270
AT3G03490
AT3G03530
AT3G03640
AT3G03720
AT3G03780
AT3G03870
AT3G03890
AT3G04080
AT3G04090
AT3G04240
AT3G04550
AT3G04590
AT3G04610
AT3G04720
AT3G04730
AT3G04770
AT3G04780
AT3G04910
AT3G04930
AT3G05010
AT3G05120
AT3G05180
AT3G05530
AT3G05640
AT3G05880
AT3G06080
AT3G06190
AT3G06340
AT3G06450
AT3G06483
AT3G06490
AT3G06500
AT3G06510
AT3G06660
AT3G06720
AT3G06780
AT3G06860
AT3G06980
AT3G07170
AT3G07300
AT3G07350
AT3G07390
AT3G07480
AT3G07540
AT3G07560
AT3G07650
AT3G07680
AT3G07760
AT3G07780
AT3G07790
AT3G08510
AT3G08530
AT3G08580
AT3G08720
AT3G08930
AT3G08940
AT3G09180
AT3G09210
AT3G09260
AT3G09370
AT3G09390
AT3G09440
AT3G09630
AT3G09640
AT3G09760
AT3G10020
AT3G10030
AT3G10080
AT3G10230
AT3G10300
AT3G10350
AT3G10420
AT3G10500
AT3G10520
AT3G10740
AT3G10920
AT3G10985
AT3G11020
AT3G11170
AT3G11200
AT3G11400
AT3G11410
AT3G11420
AT3G11530
AT3G11630
AT3G11670
AT3G11690
AT3G11710
AT3G11780
AT3G11800
AT3G11830
AT3G11930
AT3G11940
AT3G12050
AT3G12120
AT3G12260
AT3G12280
AT3G12320
AT3G12400
AT3G12490
AT3G12500
AT3G12570
AT3G12580
AT3G12740
AT3G12760
AT3G13180
AT3G13300
AT3G13340
AT3G13390
AT3G13460
AT3G13670
AT3G13672
AT3G13740
AT3G13750
AT3G13790
AT3G13860
AT3G13870
AT3G13920
AT3G13930
AT3G14010
AT3G14205
AT3G14210
AT3G14230
AT3G14290
AT3G14390
AT3G14440
AT3G14690
AT3G14750
AT3G14990
AT3G15070
AT3G15210
AT3G15380
AT3G15400
AT3G15450
AT3G15460
AT3G15530
AT3G15640
AT3G15670
AT3G15690
AT3G15780
AT3G15950
AT3G16140
AT3G16170
AT3G16190
AT3G16240
AT3G16350
AT3G16370
AT3G16400
AT3G16420
AT3G16460
AT3G16480
AT3G16500
AT3G16510
AT3G16630
AT3G16640
AT3G16670
AT3G16770
AT3G16780
AT3G16857
AT3G16860
AT3G17000
AT3G17020
AT3G17300
AT3G17365
AT3G17390
AT3G17510
AT3G17770
AT3G17800
AT3G17810
AT3G17860
AT3G17940
AT3G18050
AT3G18080
AT3G18130
AT3G18165
AT3G18190
AT3G18270
AT3G18280
AT3G18350
AT3G18490
AT3G18780
AT3G18790
AT3G18820
AT3G18830
AT3G18860
AT3G19100
AT3G19290
AT3G19390
AT3G19450
AT3G19640
AT3G19760
AT3G19800
AT3G19910
AT3G19930
AT3G19960
AT3G19970
AT3G20015
AT3G20050
AT3G20290
AT3G20300
AT3G20500
AT3G20600
AT3G20770
AT3G20920
AT3G21055
AT3G21090
AT3G21150
AT3G21670
AT3G22120
AT3G22160
AT3G22200
AT3G22230
AT3G22240
AT3G22370
AT3G22440
AT3G22550
AT3G22600
AT3G22620
AT3G22830
AT3G22840
AT3G22845
AT3G22890
AT3G23000
AT3G23070
AT3G23250
AT3G23280
AT3G23300
AT3G23530
AT3G23570
AT3G23640
AT3G23670
AT3G23700
AT3G23810
AT3G23820
AT3G23830
AT3G23920
AT3G24080
AT3G24120
AT3G24170
AT3G24220
AT3G24310
AT3G24500
AT3G24550
AT3G24560
AT3G24650
AT3G25220
AT3G25230
AT3G25585
AT3G25770
AT3G25860
AT3G25920
AT3G26100
AT3G26220
AT3G26290
AT3G26420
AT3G26450
AT3G26520
AT3G26570
AT3G26618
AT3G26650
AT3G26740
AT3G26744
AT3G26890
AT3G27090
AT3G27160
AT3G27170
AT3G27220
AT3G27240
AT3G27300
AT3G27330
AT3G27390
AT3G27690
AT3G27700
AT3G27820
AT3G27830
AT3G27850
AT3G28200
AT3G28220
AT3G28270
AT3G28715
AT3G28730
AT3G28740
AT3G28900
AT3G28910
AT3G28930
AT3G29035
AT3G29075
AT3G29160
AT3G29200
AT3G29240
AT3G29360
AT3G29575
AT3G30775
AT3G42050
AT3G42630
AT3G42790
AT3G43190
AT3G43520
AT3G43600
AT3G43720
AT3G44110
AT3G44190
AT3G44300
AT3G44310
AT3G44340
AT3G44630
AT3G44720
AT3G44860
AT3G44880
AT3G45010
AT3G45090
AT3G45100
AT3G45140
AT3G45240
AT3G45300
AT3G45600
AT3G45640
AT3G45970
AT3G45980
AT3G46000
AT3G46060
AT3G46220
AT3G46450
AT3G46540
AT3G46660
AT3G46780
AT3G46940
AT3G47000
AT3G47070
AT3G47080
AT3G47340
AT3G47430
AT3G47470
AT3G47500
AT3G47520
AT3G47550
AT3G47600
AT3G47930
AT3G48000
AT3G48040
AT3G48100
AT3G48210
AT3G48340
AT3G48360
AT3G48390
AT3G48520
AT3G48530
AT3G48680
AT3G48690
AT3G48740
AT3G48880
AT3G48930
AT3G48990
AT3G49010
AT3G49110
AT3G49120
AT3G49220
AT3G49250
AT3G49420
AT3G49530
AT3G49780
AT3G49850
AT3G49960
AT3G50000
AT3G50060
AT3G50110
AT3G50820
AT3G50970
AT3G51000
AT3G51010
AT3G51130
AT3G51140
AT3G51160
AT3G51180
AT3G51240
AT3G51260
AT3G51370
AT3G51430
AT3G51600
AT3G51630
AT3G51740
AT3G51840
AT3G51895
AT3G51990
AT3G52060
AT3G52070
AT3G52560
AT3G52590
AT3G52610
AT3G52750
AT3G52800
AT3G52850
AT3G52880
AT3G52930
AT3G52990
AT3G53110
AT3G53180
AT3G53260
AT3G53420
AT3G53460
AT3G53480
AT3G53500
AT3G53510
AT3G53530
AT3G53570
AT3G53620
AT3G53710
AT3G53750
AT3G53960
AT3G53990
AT3G54050
AT3G54110
AT3G54210
AT3G54360
AT3G54400
AT3G54440
AT3G54540
AT3G54620
AT3G54640
AT3G54660
AT3G54820
AT3G54890
AT3G54920
AT3G55030
AT3G55120
AT3G55280
AT3G55290
AT3G55410
AT3G55430
AT3G55450
AT3G55520
AT3G55530
AT3G55580
AT3G55610
AT3G55620
AT3G55630
AT3G55730
AT3G55740
AT3G55800
AT3G55840
AT3G55880
AT3G55980
AT3G56040
AT3G56090
AT3G56240
AT3G56360
AT3G56510
AT3G56860
AT3G56880
AT3G56910
AT3G56950
AT3G57010
AT3G57020
AT3G57150
AT3G57260
AT3G57280
AT3G57340
AT3G57410
AT3G57470
AT3G57520
AT3G57870
AT3G57880
AT3G58030
AT3G58120
AT3G58490
AT3G58500
AT3G58560
AT3G58610
AT3G58730
AT3G58940
AT3G59020
AT3G59060
AT3G59340
AT3G59350
AT3G59690
AT3G59930
AT3G59940
AT3G60140
AT3G60600
AT3G60640
AT3G60820
AT3G61060
AT3G61150
AT3G61240
AT3G61310
AT3G61430
AT3G61440
AT3G61890
AT3G62030
AT3G62130
AT3G62240
AT3G62290
AT3G62410
AT3G62550
AT3G62600
AT3G62650
AT3G62770
AT3G62830
AT3G62840
AT3G62980
AT3G63000
AT3G63060
AT3G63080
AT3G63160
AT3G63210
AT3G63270
AT3G63520
AT3G04000
AT3G06940
AT3G08800
AT3G10620
AT3G14160
AT3G16340
AT3G20470
AT3G21490
AT3G43160
AT3G46550
AT3G52100
AT3G56350
AT3G56450
AT3G62740
Chromosome 4:     [Click here to go to Chromosome Index]
AT4G00360
AT4G00430
AT4G00570
AT4G00720
AT4G00860
AT4G01050
AT4G01150
AT4G01250
AT4G01370
AT4G01850
AT4G01870
AT4G01940
AT4G01950
AT4G02150
AT4G02230
AT4G02280
AT4G02330
AT4G02380
AT4G02410
AT4G02450
AT4G02520
AT4G02530
AT4G02570
AT4G02770
AT4G02890
AT4G02940
AT4G03030
AT4G03200
AT4G03210
AT4G03320
AT4G03400
AT4G03420
AT4G03430
AT4G03560
AT4G04020
AT4G04470
AT4G04640
AT4G04720
AT4G04800
AT4G05020
AT4G05050
AT4G05100
AT4G05150
AT4G05180
AT4G05320
AT4G05530
AT4G08180
AT4G08390
AT4G08500
AT4G08950
AT4G08960
AT4G09010
AT4G09040
AT4G09650
AT4G09760
AT4G10040
AT4G10050
AT4G10060
AT4G10340
AT4G10480
AT4G10500
AT4G10610
AT4G10840
AT4G11220
AT4G11260
AT4G11280
AT4G11290
AT4G11570
AT4G11600
AT4G12110
AT4G12340
AT4G12420
AT4G12470
AT4G12550
AT4G12720
AT4G12730
AT4G12800
AT4G12880
AT4G13010
AT4G13350
AT4G13580
AT4G13590
AT4G13640
AT4G13780
AT4G13830
AT4G13930
AT4G14040
AT4G14070
AT4G14130
AT4G14360
AT4G14365
AT4G14400
AT4G14410
AT4G14420
AT4G14510
AT4G14540
AT4G14690
AT4G14880
AT4G14900
AT4G15110
AT4G15130
AT4G15430
AT4G15440
AT4G15480
AT4G15760
AT4G16190
AT4G16330
AT4G16370
AT4G16690
AT4G16760
AT4G16780
AT4G16830
AT4G17090
AT4G17170
AT4G17230
AT4G17270
AT4G17490
AT4G17500
AT4G17520
AT4G17530
AT4G17600
AT4G17615
AT4G17650
AT4G17870
AT4G17900
AT4G17950
AT4G18010
AT4G18020
AT4G18030
AT4G18170
AT4G18280
AT4G18350
AT4G18360
AT4G18390
AT4G18710
AT4G18950
AT4G19006
AT4G19030
AT4G19110
AT4G19120
AT4G19170
AT4G19230
AT4G19390
AT4G19410
AT4G19420
AT4G19640
AT4G19860
AT4G20110
AT4G20170
AT4G20280
AT4G20480
AT4G20830
AT4G20860
AT4G20890
AT4G21105
AT4G21110
AT4G21180
AT4G21200
AT4G21280
AT4G21410
AT4G21440
AT4G21570
AT4G21650
AT4G21660
AT4G21670
AT4G21790
AT4G21930
AT4G22080
AT4G22200
AT4G22240
AT4G22470
AT4G22670
AT4G22690
AT4G22820
AT4G22880
AT4G22890
AT4G23050
AT4G23060
AT4G23170
AT4G23190
AT4G23400
AT4G23450
AT4G23460
AT4G23600
AT4G23630
AT4G23640
AT4G23650
AT4G23670
AT4G23700
AT4G23750
AT4G23810
AT4G23850
AT4G24220
AT4G24290
AT4G24500
AT4G24520
AT4G24570
AT4G24820
AT4G24960
AT4G25100
AT4G25130
AT4G25210
AT4G25310
AT4G25370
AT4G25390
AT4G25470
AT4G25480
AT4G25490
AT4G25500
AT4G25630
AT4G25640
AT4G25670
AT4G25690
AT4G25700
AT4G25810
AT4G25820
AT4G26000
AT4G26070
AT4G26080
AT4G26130
AT4G26160
AT4G26220
AT4G26530
AT4G26670
AT4G26690
AT4G26850
AT4G26910
AT4G26970
AT4G27000
AT4G27030
AT4G27150
AT4G27280
AT4G27310
AT4G27350
AT4G27360
AT4G27410
AT4G27450
AT4G27470
AT4G27500
AT4G27520
AT4G27560
AT4G27570
AT4G27680
AT4G27730
AT4G27830
AT4G27960
AT4G28025
AT4G28140
AT4G28240
AT4G28270
AT4G28300
AT4G28400
AT4G28450
AT4G28706
AT4G28750
AT4G28760
AT4G28910
AT4G29020
AT4G29100
AT4G29190
AT4G29220
AT4G29260
AT4G29670
AT4G29680
AT4G29790
AT4G29810
AT4G30020
AT4G30170
AT4G30190
AT4G30210
AT4G30270
AT4G30280
AT4G30290
AT4G30350
AT4G30440
AT4G30470
AT4G30480
AT4G30600
AT4G30610
AT4G30650
AT4G30800
AT4G30950
AT4G30960
AT4G31010
AT4G31170
AT4G31300
AT4G31340
AT4G31500
AT4G31550
AT4G31780
AT4G31990
AT4G32020
AT4G32190
AT4G32260
AT4G32320
AT4G32340
AT4G32410
AT4G32530
AT4G32720
AT4G32760
AT4G32810
AT4G32850
AT4G32960
AT4G33010
AT4G33050
AT4G33070
AT4G33150
AT4G33250
AT4G33430
AT4G33510
AT4G33540
AT4G33550
AT4G33630
AT4G33666
AT4G33670
AT4G33920
AT4G33950
AT4G33960
AT4G33980
AT4G34000
AT4G34030
AT4G34131
AT4G34135
AT4G34138
AT4G34180
AT4G34230
AT4G34240
AT4G34270
AT4G34450
AT4G34460
AT4G34490
AT4G34540
AT4G34710
AT4G34860
AT4G34890
AT4G34920
AT4G34970
AT4G34980
AT4G34990
AT4G35000
AT4G35080
AT4G35090
AT4G35100
AT4G35110
AT4G35140
AT4G35220
AT4G35320
AT4G35480
AT4G35490
AT4G35510
AT4G35630
AT4G35750
AT4G35770
AT4G35780
AT4G35830
AT4G35970
AT4G36010
AT4G36130
AT4G36220
AT4G36360
AT4G36670
AT4G36690
AT4G36730
AT4G36780
AT4G36800
AT4G36850
AT4G36920
AT4G36960
AT4G36980
AT4G36990
AT4G37180
AT4G37260
AT4G37300
AT4G37370
AT4G37390
AT4G37430
AT4G37450
AT4G37470
AT4G37510
AT4G37540
AT4G37590
AT4G37610
AT4G37760
AT4G37790
AT4G37870
AT4G37930
AT4G37980
AT4G37990
AT4G38060
AT4G38400
AT4G38500
AT4G38510
AT4G38550
AT4G38570
AT4G38640
AT4G38770
AT4G38810
AT4G38840
AT4G38920
AT4G38960
AT4G38970
AT4G39010
AT4G39090
AT4G39100
AT4G39170
AT4G39220
AT4G39260
AT4G39330
AT4G39350
AT4G39520
AT4G39680
AT4G39780
AT4G39800
AT4G39830
AT4G39890
AT4G39940
AT4G39950
AT4G39955
AT4G40040
AT4G40045
AT4G40050
AT4G40060
AT4G01020
AT4G06746
AT4G08260
AT4G08350
AT4G12510
AT4G14580
AT4G15540
AT4G17550
AT4G18670
AT4G20850
AT4G25970
AT4G26200
AT4G27820
AT4G28060
AT4G31030
AT4G31870
AT4G33360
AT4G39670
Chromosome 5:     [Click here to go to Chromosome Index]
AT5G01160
AT5G01210
AT5G01290
AT5G01350
AT5G01430
AT5G01520
AT5G01530
AT5G01600
AT5G01740
AT5G01810
AT5G02020
AT5G02040
AT5G02100
AT5G02120
AT5G02260
AT5G02500
AT5G02620
AT5G02810
AT5G02840
AT5G02870
AT5G03210
AT5G03230
AT5G03240
AT5G03280
AT5G03380
AT5G03430
AT5G03460
AT5G03520
AT5G03610
AT5G03760
AT5G03840
AT5G03910
AT5G04340
AT5G04550
AT5G04600
AT5G04760
AT5G04930
AT5G04950
AT5G05010
AT5G05110
AT5G05170
AT5G05210
AT5G05410
AT5G05520
AT5G05580
AT5G05600
AT5G05690
AT5G05730
AT5G06320
AT5G06370
AT5G06530
AT5G06760
AT5G06860
AT5G06870
AT5G06980
AT5G07120
AT5G07300
AT5G07440
AT5G08130
AT5G08180
AT5G08290
AT5G08300
AT5G08400
AT5G08500
AT5G08530
AT5G08580
AT5G08590
AT5G08610
AT5G08640
AT5G08650
AT5G08670
AT5G08680
AT5G08690
AT5G09220
AT5G09440
AT5G09530
AT5G09590
AT5G09600
AT5G09620
AT5G09660
AT5G09810
AT5G09850
AT5G09880
AT5G09890
AT5G09900
AT5G10190
AT5G10300
AT5G10410
AT5G10450
AT5G10540
AT5G10840
AT5G10860
AT5G10920
AT5G10960
AT5G10980
AT5G11200
AT5G11280
AT5G11420
AT5G11520
AT5G11670
AT5G11680
AT5G11740
AT5G11770
AT5G11800
AT5G11850
AT5G11890
AT5G12010
AT5G12150
AT5G12470
AT5G12940
AT5G13100
AT5G13110
AT5G13160
AT5G13190
AT5G13440
AT5G13490
AT5G13630
AT5G13650
AT5G13740
AT5G13750
AT5G13760
AT5G13800
AT5G13810
AT5G13930
AT5G13970
AT5G14120
AT5G14180
AT5G14270
AT5G14310
AT5G14540
AT5G14760
AT5G14780
AT5G14920
AT5G15080
AT5G15210
AT5G15240
AT5G15310
AT5G15490
AT5G15530
AT5G15650
AT5G15780
AT5G15850
AT5G15910
AT5G15960
AT5G15970
AT5G16050
AT5G16070
AT5G16150
AT5G16220
AT5G16270
AT5G16440
AT5G16510
AT5G16550
AT5G16620
AT5G16750
AT5G16840
AT5G16880
AT5G16970
AT5G17020
AT5G17230
AT5G17300
AT5G17310
AT5G17380
AT5G17460
AT5G17670
AT5G17790
AT5G17820
AT5G17920
AT5G18100
AT5G18130
AT5G18240
AT5G18420
AT5G18620
AT5G18670
AT5G19120
AT5G19180
AT5G19350
AT5G19370
AT5G19440
AT5G19690
AT5G19860
AT5G19890
AT5G19990
AT5G20000
AT5G20020
AT5G20060
AT5G20150
AT5G20160
AT5G20180
AT5G20230
AT5G20300
AT5G20520
AT5G20620
AT5G20630
AT5G20720
AT5G20830
AT5G20900
AT5G20920
AT5G20960
AT5G21010
AT5G21100
AT5G21160
AT5G21990
AT5G22000
AT5G22060
AT5G22100
AT5G22120
AT5G22280
AT5G22500
AT5G22580
AT5G22860
AT5G22920
AT5G22950
AT5G23010
AT5G23060
AT5G23250
AT5G23310
AT5G23340
AT5G23430
AT5G23450
AT5G23670
AT5G23740
AT5G23750
AT5G23820
AT5G24020
AT5G24120
AT5G24150
AT5G24300
AT5G24310
AT5G24400
AT5G24450
AT5G24530
AT5G24650
AT5G24770
AT5G24780
AT5G24810
AT5G24930
AT5G24990
AT5G25110
AT5G25265
AT5G25460
AT5G25510
AT5G25540
AT5G25610
AT5G25770
AT5G25780
AT5G25980
AT5G26210
AT5G26260
AT5G26340
AT5G26660
AT5G26710
AT5G26751
AT5G27150
AT5G27280
AT5G27350
AT5G27640
AT5G27670
AT5G27720
AT5G27730
AT5G27840
AT5G27850
AT5G28060
AT5G28540
AT5G28750
AT5G30510
AT5G33290
AT5G33320
AT5G34850
AT5G35320
AT5G35360
AT5G35410
AT5G35460
AT5G35620
AT5G35840
AT5G36160
AT5G36880
AT5G37360
AT5G37510
AT5G37540
AT5G37740
AT5G37770
AT5G37780
AT5G38380
AT5G38410
AT5G38420
AT5G38430
AT5G38470
AT5G38480
AT5G38520
AT5G38650
AT5G38895
AT5G39340
AT5G39570
AT5G39580
AT5G39590
AT5G39600
AT5G39610
AT5G39670
AT5G40390
AT5G40420
AT5G40580
AT5G40740
AT5G40770
AT5G40810
AT5G40850
AT5G40890
AT5G40950
AT5G41040
AT5G41210
AT5G41410
AT5G41600
AT5G41670
AT5G41970
AT5G42050
AT5G42080
AT5G42090
AT5G42180
AT5G42220
AT5G42360
AT5G42380
AT5G42530
AT5G42570
AT5G42650
AT5G42740
AT5G42940
AT5G42980
AT5G43260
AT5G43280
AT5G43320
AT5G43430
AT5G43440
AT5G43450
AT5G43470
AT5G43760
AT5G43780
AT5G43850
AT5G44020
AT5G44070
AT5G44110
AT5G44260
AT5G44420
AT5G44580
AT5G44790
AT5G45110
AT5G45130
AT5G45190
AT5G45280
AT5G45310
AT5G45340
AT5G45410
AT5G45500
AT5G45550
AT5G45750
AT5G45900
AT5G46250
AT5G46630
AT5G46900
AT5G47030
AT5G47040
AT5G47120
AT5G47210
AT5G47230
AT5G47240
AT5G47330
AT5G47550
AT5G47560
AT5G47640
AT5G47680
AT5G47880
AT5G47930
AT5G48160
AT5G48180
AT5G48230
AT5G48300
AT5G48380
AT5G48450
AT5G48485
AT5G48580
AT5G48655
AT5G48930
AT5G49230
AT5G49360
AT5G49450
AT5G49460
AT5G49480
AT5G49510
AT5G49830
AT5G50360
AT5G50420
AT5G50460
AT5G50700
AT5G50960
AT5G51070
AT5G51100
AT5G51830
AT5G51940
AT5G51950
AT5G51970
AT5G52040
AT5G52200
AT5G52300
AT5G52310
AT5G52650
AT5G52660
AT5G53120
AT5G53130
AT5G53140
AT5G53300
AT5G53350
AT5G53620
AT5G53770
AT5G53890
AT5G53970
AT5G54160
AT5G54230
AT5G54270
AT5G54310
AT5G54390
AT5G54500
AT5G54540
AT5G54600
AT5G54680
AT5G54750
AT5G54770
AT5G54810
AT5G54940
AT5G55100
AT5G55190
AT5G55220
AT5G55310
AT5G55640
AT5G55710
AT5G55920
AT5G55960
AT5G56000
AT5G56010
AT5G56030
AT5G56150
AT5G56170
AT5G56290
AT5G56350
AT5G56460
AT5G56870
AT5G56980
AT5G57050
AT5G57090
AT5G57120
AT5G57350
AT5G57550
AT5G57560
AT5G57630
AT5G57655
AT5G57660
AT5G57800
AT5G57840
AT5G57870
AT5G57890
AT5G57930
AT5G58020
AT5G58060
AT5G58070
AT5G58090
AT5G58260
AT5G58330
AT5G58575
AT5G58590
AT5G58620
AT5G58670
AT5G58720
AT5G58950
AT5G59210
AT5G59290
AT5G59310
AT5G59320
AT5G59420
AT5G59540
AT5G59730
AT5G59750
AT5G59820
AT5G59850
AT5G60360
AT5G60640
AT5G60660
AT5G60670
AT5G60790
AT5G60910
AT5G61380
AT5G61420
AT5G61500
AT5G61520
AT5G61530
AT5G61590
AT5G61780
AT5G61790
AT5G61820
AT5G61960
AT5G61990
AT5G62050
AT5G62130
AT5G62350
AT5G62490
AT5G62530
AT5G62540
AT5G62640
AT5G62740
AT5G62790
AT5G62900
AT5G63160
AT5G63190
AT5G63510
AT5G63980
AT5G64040
AT5G64070
AT5G64100
AT5G64130
AT5G64150
AT5G64200
AT5G64250
AT5G64260
AT5G64300
AT5G64310
AT5G64340
AT5G64400
AT5G64430
AT5G64440
AT5G64470
AT5G64640
AT5G64740
AT5G64813
AT5G64920
AT5G64960
AT5G65010
AT5G65110
AT5G65180
AT5G65260
AT5G65280
AT5G65300
AT5G65380
AT5G65630
AT5G65930
AT5G66055
AT5G66120
AT5G66360
AT5G66390
AT5G66400
AT5G66480
AT5G66530
AT5G66570
AT5G66760
AT5G66780
AT5G66900
AT5G66950
AT5G67030
AT5G67140
AT5G67170
AT5G67220
AT5G67250
AT5G67300
AT5G67330
AT5G67400
AT5G67480
AT5G67510
AT5G67580
AT5G67590
AT5G03270
AT5G04310
AT5G05740
AT5G09460
AT5G21930
AT5G22450
AT5G24270
AT5G33360
AT5G40280
AT5G40920
AT5G42010
AT5G44180
AT5G49620
AT5G50940
AT5G51990
AT5G52400
AT5G52910
AT5G62470
AT5G63790
AT5G67190

List of TF :

STIFDB provides a non-redundant collection of abiotic stress responsive genes in Arabidopsis thaliana, with details about probable Transcription Factor Binding Sites in their promoters as predicted by a rigorous Hidden Markov Model based search method called STIF. In response to abiotic stresses like drought, cold, salinity, high light, heat, etc, 10 specific families of transcription factors are known to be involved. HMM-based models are used to identify binding sites of transcription factors belonging to these families. We have also consulted literature to cross-validate the Transcription Factor Binding Sites predicted by the STIF method.

Representative ColorTranscription Factor NameFrequency in DatabaseSearch Link
    ABRE_ABI3_VP1
5Link
    AuxRE_ARF
1174Link
    C_ABRE_bZIP
205Link
    DREB_AP2_EREBP
815Link
    G_ABRE_bZIP
145Link
    G_box1_bZIP
88Link
    G_box2_bZIP
856Link
    G_box_bHLH
781Link
    GCC_box_AP2_EREBP
260Link
    HBE_HB
154Link
    HSE1_HSF
2097Link
    Myb_box1_MYB
1935Link
    Myb_box2_MYB
882Link
    Myb_box3_MYB
1080Link
    Myb_box4_MYB
567Link
    Myb_box5_MYB
2628Link
    Nac_box_NAC
846Link
    N_box_bHLH
579Link
    W_box_WRKY
1734Link


Contact:
Prof. R. Sowdhamini [mini@ncbs.res.in]
Prof. M. Udayakumar

STIFdb Team:
Prof. R. Sowdhamini
Prof. M. Udayakumar
K. Shameer
S. Ambika
Susan Mary Varghese