PeptideMine - Web Server for Identification of Peptide Substrates from Interacting Proteins :

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1. Enter your valid E-mail ID: PeptideMine Results will be sent to this email address

2. Select the organism: Homo Sapiens Mus Musculus Caenorhabiditis Elegans Drosophila Melanogaster Saccharomyces Cerevisiae Arabidopsis thaliana

3. Enter Protein ID:

4. Select confidence score to identify interacting proteins from STRING (v 7) database:
test confidence(>0.924) Highest confidence(>0.900) High confidence(>0.700) Medium confidence(>0.400) Low confidence(>0.150)

5. Select prediction method to search for interacting proteins:
All method Neighborhood Gene Fusion Co-expression Experiments Co-occurrence Databases Textmining

6. High-light interacting partners using GO-term/ID:

7. Switch off PSI-PRED & DISOPRED predictions:

8. Select the search program:
PeptideMine Search BLASTP Search PROSITE Pattern Search

9. Enter specific residue(s)/sequence/pattern to search in interacting proteins:

10. Select the size of peptide:
4 5 6 7 8 9 10 11 12 13 14 15

Contact:
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Prof. B. Gopal (Contact : bgopal@mbu.iisc.ernet.in)

PeptideMine - Team:
K. Shameer, LL Madan, S. Veeranna, Prof. B. Gopal & Prof. R. Sowdhamini