PASS2
  • Superfamily Details
  • Alignment & HMM

Superfamily Details

Superfamily summary
Superfamily Name:  Head-to-tail joining protein W, gpW
Class Name:  Alpha and beta proteins (a+b)
Fold Name:  gpW/XkdW-like
Number of Members:  1
Average Size: 
Members
SCOP ID Name Source
d1hywa- Head-to-tail joining protein W, gpW Bacteriophage lambda [TaxId: 10710]

Alignment Based On Similarities In Structural Features using Comparer

                             10        20        30        40        50  
d1hywa-  (   1 )    mtrqeeLAaaraaLhdLmtgkrvAtvqkdgrrVeftatsVsdLkkyIael
                       aaaaaaaaaaaaaa      bbbb    bbbb    aaaaaaaaaaa

                            
d1hywa-  (  51 )    evqtgmtq
                    aaa     

solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla ç
positive phi: italic x