PASS2
  • Superfamily Details
  • Alignment & HMM

Superfamily Details

Superfamily summary
Superfamily Name:  Eukaryotic DNA topoisomerase I, dispensable insert domain
Class Name:  All alpha proteins
Fold Name:  Long alpha-hairpin
Number of Members:  1
Average Size: 
Members
SCOP ID Name Source
d1k4ta1 Eukaryotic DNA topoisomerase I, dispensable insert domain Human (Homo sapiens) [TaxId: 9606]

Alignment Based On Similarities In Structural Features using Comparer

                             10        20        30        40        50  
d1k4ta1  ( 641 )    eksmmnlqtkidakkeqladarrdlksakadakvmkdaktkkvveskkka
                       aaaaaaaaaaaaaaaaaaaaaaaaaaaaaa    aaaaaaaaaaaaa

                             60        70  
d1k4ta1  ( 691 )    vqrleeqlmklevqatdreenk
                    aaaaaaaaaaaaaaaaaaaa  

solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla ç
positive phi: italic x