PASS2
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Superfamily Details

Superfamily summary
Superfamily Name:  HR1 repeat
Class Name:  All alpha proteins
Fold Name:  Long alpha-hairpin
Number of Members:  2
Average Size: 
Members
SCOP ID Name Source
d1cxzb- Protein kinase c-like 1, pkn/prk1 Human (Homo sapiens) [TaxId: 9606]
d1urfa- Protein kinase c-like 1, pkn/prk1 Human (Homo sapiens) [TaxId: 9606]

Alignment Based On Similarities In Structural Features using Comparer

                             10        20        30        40        50  
d1cxzb-  (  13 )    wsLleqlglagadlaapgvqqqLelererLrreirkelklkegAenlrra
d1urfa-  ( 119 )                     gipatnlsrvaglekqlaiElkvkqgAenmiqt
                                            aaaaaaaaaaaaaaaaaaaaaaaaaa

                             60        70        80        90       
d1cxzb-  (  63 )    ttd--lgr--slgpvelllrgSsrrldlLhqqlqeLhahv        
d1urfa-  ( 152 )    YsngstkdrkllltAqqmlqdSktkidiirmqlrralqadqlenqaap
                    aaa         aaaaaaaaaaaaaaaaaaaaaaaaa           

solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla ç
positive phi: italic x

Jmol view

Jmol Model View
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Response Logs

Matrices

1. Percentage Identity Matrix  [View | Download]
2. Distance Matrix  [View | Download]

CUSP Results

CUSP Result   [View | Download]

Alistat - Alignment Statistics

Alignment Statistics  [Download]

SMotif - Conserved Structural Motifs

SMotif Result   [View | Download]

MeanRMS

MeanRMS  [Download]