PASS2
  • Superfamily Details
  • Alignment & HMM

Superfamily Details

Superfamily summary
Superfamily Name:  XkdW-like
Class Name:  Alpha and beta proteins (a+b)
Fold Name:  gpW/XkdW-like
Number of Members:  1
Average Size: 
Members
SCOP ID Name Source
d2hg7a1 Phage-like element PbsX protein XkdW Bacillus subtilis [TaxId: 1423]

Alignment Based On Similarities In Structural Features using Comparer

                             10        20        30        40        50  
d2hg7a1  (   1 )    milydAimykypnAvsrkdFelrndgngsyiekwnlraplPtqaeletww
                      aaaaaaaa         bbbbb    bbbbbb        aaaaaaaa

                             60  
d2hg7a1  (  51 )    eelqknppye
                    aaaaa     

solvent inaccessible: UPPER CASE X
solvent accesible: lower case x
alpha helix: red x
beta strand: blue x
3 - 10 helix: maroon x
hydrogen bond to main chain amide: bold x
hydrogen bond to mainchain carbonyl: underline x
disulphide bond: cedilla ç
positive phi: italic x